Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0070 |
Symbol | |
ID | 5867758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 75779 |
End bp | 76597 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545143 |
Product | hypothetical protein |
Protein accession | YP_001666322 |
Protein GI | 167031091 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.791848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000000308112 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCGAGC ATCAATTACT GGGGGCGGGC TTGGGCGCGA TCATCGGCGC GGTGTTGGCG TTGACTGGCG CAGGTGGCGG CATTCTCGCA GTACCCTTGC TGGTGTTCGG TCTGGGCTTG TCGATGGTCG AAGCGGCACC GGTCGGCTTG CTGGCCGTGG GCCTGGCGGC GGCAGTGGGC GCTGTGCTGG GCTTGCGCCA AGGCTTGGTG CGTTACCGGG CGGCATTGTT CATTGCGCTG GTCGGTGTAG CGGCGGCACC CTTCGGGCTG ATGCTGGCGC ACCGTCTGCC CAATACACCA TTGCAGTTGG TGTTCGCCGG GGTGCTGGTT TATGCCTGCC TGCGTATCTG GCGCAAGGCG GCCAAAGAAT TGCGCGGCGA AGCCAATGAT GCCCATCGTT ACATCGAGCC ATGTGTGCTG AATCCGTTGC AGGGCCGTTT GCGCTGGACC CTACCCTGTG CACGCGCATT GGCATTCACG GGTGCCTTGT CCGGGTTGTT GTCCGGCCTG CTGGGGGTGG GCGGTGGGTT TGTCATCATC CCGGCCCTGA ACCGCTACAC CAACCTGCGC ATGGCCAGTA TCGTGTCCAC CTCGCTGGCG GTGATCGCCC TGGTCTCCAC TGGCAGCGTG GTCAGCGCCA GCCTGGCGGG CGTCATGCAC TGGCAGGTCG GTGCCCCGTT TGCCGTCGGC GCGGTACTTG GCCTGCTGTT GGCGCGGCCT TTGGCTGCCA GGCTGGCAGG GCCGCGCTTA CAGCAGATGT TTGCAGTGGC AGGTTGGACG GCGGCCTTGC TGCTGGCTGG CAAGTCGCTA TTGGGCTAG
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Protein sequence | MIEHQLLGAG LGAIIGAVLA LTGAGGGILA VPLLVFGLGL SMVEAAPVGL LAVGLAAAVG AVLGLRQGLV RYRAALFIAL VGVAAAPFGL MLAHRLPNTP LQLVFAGVLV YACLRIWRKA AKELRGEAND AHRYIEPCVL NPLQGRLRWT LPCARALAFT GALSGLLSGL LGVGGGFVII PALNRYTNLR MASIVSTSLA VIALVSTGSV VSASLAGVMH WQVGAPFAVG AVLGLLLARP LAARLAGPRL QQMFAVAGWT AALLLAGKSL LG
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