Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0040 |
Symbol | |
ID | 5868039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 43189 |
End bp | 44094 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641545113 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_001666292 |
Protein GI | 167031061 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTTCAA ATCATGACCA TGGCAGCGCT GCAGTACGCG AGGGGCATCA GAAGAAGCTA ATCATGGCGC TCGGCTTGAC TGGCAGCTTC ATGATTGCAG AAGTGATCGG TGCGTGGATT ACCGGCAGCC TGGCGCTGCT GTCGGACGCA TCTCACATGT TCACAGATAC TGCCGCCTTG GCGATCTCAC TGATTGCACT TCAGATAGCC AAGCGGCCGG CGGATCAGAA AAGAACCTTC GGCTATGCGC GCCTGGAAAT TCTGGCTTCG ACGTTCAACG CCGTGCTGCT CTTCCTGGTG GCGATGTACA TCTTGTATGA GGCCTACCAG CGCTTCTTCA TGCCGGCGGA GATCGCTACC GGAGCGATGA TGTGGATCGC AATCGCCGGC CTGATCATCA ACCTAATTTC GATGCGCCTT CTGGCATCTG CGAGCAACGA AAGCCTCAAC GTCAAAGGAG CCTACCTCGA AGTTTGGAGC GACATGCTCG GCTCGCTTGG CGTAATCATC GCGGCACTTA TCATCCGCTT CACCGGCTGG ACCTGGGTCG ACACGATTGT CGCTGTGGCG ATCGGCCTTT GGGTTCTGCC GCGGACGTGG CAGTTGCTTC GCGAAAGCCT GGGGATCCTC ATGGAGGGTG TCCCGAGGGG GCTCGACGTT ACGGCAATCG AGGCCACCAT CCTCGGAGTA GATGGCGTGA CGGACGTTCA TGACTTGCAC GTGTGGGCTG TCAGCAGTGG CAGTAACGTG ATGACGTCGC ACGTAGTGGT TCGGGATTCT GCAGATGGGG ATGCTGTGTT GGCGGCCGTC GTGGATGCTG TCAGCGATGC ATTCGAAATC CATCACTGCA CCATCCAGAT CGAGCGGGCA GCTTTCCACG AGAGCGTTCC CTCACCCTCG CACTGA
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Protein sequence | MGSNHDHGSA AVREGHQKKL IMALGLTGSF MIAEVIGAWI TGSLALLSDA SHMFTDTAAL AISLIALQIA KRPADQKRTF GYARLEILAS TFNAVLLFLV AMYILYEAYQ RFFMPAEIAT GAMMWIAIAG LIINLISMRL LASASNESLN VKGAYLEVWS DMLGSLGVII AALIIRFTGW TWVDTIVAVA IGLWVLPRTW QLLRESLGIL MEGVPRGLDV TAIEATILGV DGVTDVHDLH VWAVSSGSNV MTSHVVVRDS ADGDAVLAAV VDAVSDAFEI HHCTIQIERA AFHESVPSPS H
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