Gene PputGB1_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0033 
Symbol 
ID5868032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp36052 
End bp37248 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content55% 
IMG OID641545106 
Producthypothetical protein 
Protein accessionYP_001666285 
Protein GI167031054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.758956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGTTG AGCCCAAGGC GAGCGCGATC CACCATCCAC AGGCCGCTAC TGCCGCGCGC 
CAATTCTATG CCGGCACTAC TCGTCAAAAA ATAGGTGAGT GCTTACCCGG CAGGCAATGG
GCTACTATCG AGCCCTATAT CTATCCGAAA GGGTTAGCTC CGTTGCCAGG GAATTGCATG
CAGGCCATCG ATATTGAAAA CGCGATCGTT CTTCCTTGGG GGCTTGGCTC AAGATCGCCC
CATGACCTGT TTTCTGTGTG CGCAGAAATC ATTAACTGCC CTGGTGACAT CGTTTTAGAC
GCTAGCAACC TCTCGTATAT CGATCCGTTA GGGATGGCCA CGCTGCGAGC GTTGTTTGAA
AACCAGTTGG TCCAGAAGCG AGTTTCGATG CAGTTTTTGA GCAGAGACCT GACCTCCTAC
CTGGCCAGGA TGGATTTTTT CAAGGACATT GATGTAGAGG GTGTAGATCT ATCGGGGGTA
GGACGTCGAA ACGACCGAAG CACCTCGTTG GTGGAAATCA CCAAAATCAG CGAACACCAT
CAAGCAGAGG CTGCAGCCTC TCGCCTCGCT AGAGCTATTA CGGGAAGGTT GACTCAATCG
GACCCGGATG CCCCAGTCGA CGAGCACACG GGACGGAATG AGTTTGACTC CTACCGGGGC
CCTCTGGAGT ATTCGCTCAA GGAGCTATTG GAAAACTCGC TTACTCACGC CCGCAGAGAG
GGACGTGGTG ACGCCGCCGT TTGGCTGACC TGTCAGTTTT ATCCAAAATT GAACCTTGTA
CGCATGGCCA TCGTCGATAA TGGGTGTGGG TTTCTCGCGA CACTGAGGAA TCACCCTGAG
CTTCATGACC GCACGCATTT GCACGCGATC GAGGCGGCAC TCAAACCGCG AGTGAGCTGC
AACCGGGGTG CGATGGCCCA GATCCTGGGT AGCGAGAACC AAGGTATCGG GTTAACAACT
ACCGCAAAAA TTGCAGACGC GGCGGGCGGT GGTTTGATCA TCGTGAGCGG CAATGGCATA
CATGACACAA AGCGTCGGCA GTCTCAGGAG CTGCATGATG CGCTGTGGAA TGGTGTATCG
ATCGCGTTTA GCTGTACCCG TGAGCTGCTG CCCACCATTT CGATCAGTGA CTTGCTGCCG
AAGGACGATG CAGGACAGGT TGACGACGAT CTCGACCTAG ATCTGAATTT CCGCTAG
 
Protein sequence
MRVEPKASAI HHPQAATAAR QFYAGTTRQK IGECLPGRQW ATIEPYIYPK GLAPLPGNCM 
QAIDIENAIV LPWGLGSRSP HDLFSVCAEI INCPGDIVLD ASNLSYIDPL GMATLRALFE
NQLVQKRVSM QFLSRDLTSY LARMDFFKDI DVEGVDLSGV GRRNDRSTSL VEITKISEHH
QAEAAASRLA RAITGRLTQS DPDAPVDEHT GRNEFDSYRG PLEYSLKELL ENSLTHARRE
GRGDAAVWLT CQFYPKLNLV RMAIVDNGCG FLATLRNHPE LHDRTHLHAI EAALKPRVSC
NRGAMAQILG SENQGIGLTT TAKIADAAGG GLIIVSGNGI HDTKRRQSQE LHDALWNGVS
IAFSCTRELL PTISISDLLP KDDAGQVDDD LDLDLNFR