Gene PputGB1_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0031 
Symbol 
ID5868030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp32704 
End bp35220 
Gene Length2517 bp 
Protein Length838 aa 
Translation table11 
GC content60% 
IMG OID641545104 
Productcopper-translocating P-type ATPase 
Protein accessionYP_001666283 
Protein GI167031052 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCT GTCACAGGCA CTACAGTTAT TTAATTTTGT TGCTCTGTCC GCTGACGCAA 
CTCTTCGGGC ACAACCATGG CGGGTATTCT CACCAGAAGG GTGAAAACTC GTCCAAACCG
GACAACAAAG GGAACTACTT CATGCACACC GAATCGTGCC AGCATGACCA TGACCATGAC
CACTCGCACC CGTATGAGCA ACCGGATGGT AGTCAGCGCG ATTTGGTATG CGGTATGACG
GTGCCACCGG ATAGTCGCTA CTTCGAGCTA TACGAGGGAA GGACATACCG CTTCTGCAGT
GAAAAGTGCC TGACGAAATT CCGCGCAGCG CCTGTGCATT ATCTTAGCCC TCCCCAGGAC
CAAGAACACG CGGGCCATCT CCACTCGGCT GCCCCGCAGC CAAGCAACGC GGCGGACGCC
GAATACACTT GCCCGATGCA TCCCCAAATC CGCCAGCGTG GGCCGGGCAG TTGCCCAATC
TGTGGCATGG CCCTAGAGCC GGTAATACCG GAGCTTGAGG AAGACGAGAA CCCGGAACTC
AAGGACTTCT CCCGCCGCTT CTGGTGGACC TTGCCCCTGA CGGTCATCGT GACCGTGTTG
GCCATGACTG CCCACCAACT CCAATTGCTG CATGGTGCCA CACAGAATTG GGTGGAGTTG
ATTCTGGCCA CTCCCGTGAC ACTATGGGCT GGCTGGCCGT TTTTCGTGCG TGGGGTCGCA
TCGATTCGTA ATCGCAGCCC GAATATGTGG ACCCTGATAG GTTTGGGAAC GGCTGCGGCG
TACCTATACA GCGTTGCGGC CACAGTGTTC CCGCAGGTTT TCCCGACGAC TTTCATGCAG
GATGGCCGCA TCGGTGTCTA CTTCGAAGCG GCTGCAGTCA TCATCTCATT AACGTTGCTC
GGCCAAATGC TCGAGCTCAA GGCGCGCTCA CAAACCTCCG CCGCCATCAA GTCGCTCCTG
GGTCTTGCCC CCAAGACGGC CCGTCGCATC GGGGCCGATG GTCAGGAGGA AGATATTCCG
CTCACCCACG TGCATACGGG CGACCACCTG CGCGTTCGCC CTGGCGAGAA GGTGCCGGTC
GACGGGGTGG TCCTGGAAGG CGAAAGTGCT ATCGATGAAT CCATGCTGAC AGGCGAGCCC
GTGCCAGTGA TGAAGAAAGC TGGGGATGCA CTCATCGGTG CCACGCTGAA TACCCACGGC
AGCCTTGTGA TGGCGGCGCA GAAGGTCGGC GCCGAGACAG TGCTCTCGCA AATCGTGCAG
ATGGTCGCGC GGGCTCAGCG CTCGAAAGCC CCGATGCAGC GGATGGCGGA CACCGTGGCC
GGCTATTTCG TCATGGGGGT GATTCTGGTC GCGCTGGTCA CGCTCTTCGG CTGGGGGCTT
TTCGGACCGG AGCCTGGCTG GGTCTTCGGC CTGATCAATG CGGTCGCGGT CCTGATCATT
GCCTGCCCCT GCGCGCTCGG CCTAGCCACT CCCATGTCGA TCATGGTCGC TACCGGGAAG
GCTGCCAGCA GTGGCGTGCT CTTCCGAGAC GCCAGTGCTA TCGAGAACCT CTGCAAGATC
GACACGCTGA TCGTCGACAA GACCGGGACC CTCACCGAGG GCCGGCCAGT GTTTCATAGC
GTGGTCGGTA CCGGGCAGTT CATGCCACCC GAAGTCTTGC GCCTTGCCGC CAGCCTGGAC
CAAGGCAGCG AGCATCCGCT GGCACATGCG ATTGTCGATC ATGCGCGAGC GCATGGACAC
AGCTTGTCCA AGCCAGAGGC GTTTGAGTCG GGCTCTGGGA TCGGTGTACG TGGCCAGGTG
AACGGCAAAC GGCTGCAGCT TGGCAACACG ACCTTGATGG AAGAGGCTGG CCTCGACACC
AGTCCGTTGC GAGACCGCGC CGAGCAGCTG CGTCTGGAAG GCATGAGTAT CATGTACTTG
GCCGTCGATG GCGTGCTCGC TGGCCTGCTA GCGGTGTCCG ATCCGGTCAA ACCCACCTCC
AAGGAGGCGG TAACCCGGCT ACAGGCAGAA GATGTGAAGG TCATCATGGC CACCGGCGAC
GGCCTGACTA CGGCACGTGC GGTCGCGAAA CAACTCGGCA TCGAGGAAGT CCACGGAGAA
GTGAAACCCG AGGACAAGGA GCAACTGGTG GCGCTCCTGC AGGGCGATAA GCGCCGGGTT
GCCATGGCAG GAGATGGGAT CAACGATGCC CCTGCGCTGG CCCGGGCTGA TGTCGGGATC
GCCATGGGAA CTGGCACCGA TGTTGCCATG AACAGCTCCC AGTTGACGCT GGTCAAGGGC
GACCTGATGG GCATCCTGCG GGCCAGAACA CTATCCGTGG CCACGGTGAA GAACATGCGT
CAAAACTTGG GCTTCGCATT CTTCTACAAC GCTATGGGCA TACCGCTGGC GGCAGGTTTG
TTCTACCCGC TTACCGGCCA TCTATTGTCA CCGATGATTG CGGCATTGGC CATGAGCGTA
AGTTCGGCTT CCGTGGTATT CAACGCACTG CGGCTGAAGC GCGTAGTCAC AGACTGA
 
Protein sequence
MATCHRHYSY LILLLCPLTQ LFGHNHGGYS HQKGENSSKP DNKGNYFMHT ESCQHDHDHD 
HSHPYEQPDG SQRDLVCGMT VPPDSRYFEL YEGRTYRFCS EKCLTKFRAA PVHYLSPPQD
QEHAGHLHSA APQPSNAADA EYTCPMHPQI RQRGPGSCPI CGMALEPVIP ELEEDENPEL
KDFSRRFWWT LPLTVIVTVL AMTAHQLQLL HGATQNWVEL ILATPVTLWA GWPFFVRGVA
SIRNRSPNMW TLIGLGTAAA YLYSVAATVF PQVFPTTFMQ DGRIGVYFEA AAVIISLTLL
GQMLELKARS QTSAAIKSLL GLAPKTARRI GADGQEEDIP LTHVHTGDHL RVRPGEKVPV
DGVVLEGESA IDESMLTGEP VPVMKKAGDA LIGATLNTHG SLVMAAQKVG AETVLSQIVQ
MVARAQRSKA PMQRMADTVA GYFVMGVILV ALVTLFGWGL FGPEPGWVFG LINAVAVLII
ACPCALGLAT PMSIMVATGK AASSGVLFRD ASAIENLCKI DTLIVDKTGT LTEGRPVFHS
VVGTGQFMPP EVLRLAASLD QGSEHPLAHA IVDHARAHGH SLSKPEAFES GSGIGVRGQV
NGKRLQLGNT TLMEEAGLDT SPLRDRAEQL RLEGMSIMYL AVDGVLAGLL AVSDPVKPTS
KEAVTRLQAE DVKVIMATGD GLTTARAVAK QLGIEEVHGE VKPEDKEQLV ALLQGDKRRV
AMAGDGINDA PALARADVGI AMGTGTDVAM NSSQLTLVKG DLMGILRART LSVATVKNMR
QNLGFAFFYN AMGIPLAAGL FYPLTGHLLS PMIAALAMSV SSASVVFNAL RLKRVVTD