| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0017 |
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| Symbol | |
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| ID | 5868016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 17629 |
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| End bp | 19587 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641545090 |
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| Product | CopA family copper resistance protein |
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| Protein accession | YP_001666269 |
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| Protein GI | 167031038 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0816359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA AAACCACGAG ACGTTCATTC GTCAAAGGCC TGGCTGCTAC CGGACTACTG
GGTGGGCTGG GCATGTGGCG CGCGCCGGTC TGGGCCGTAA CCAGCCCTGG CCAGCCTAAC
GTACTGACCG GCACCGATTT TGACCTGTAC ATCGGGGAGC TCCCGGTGAA CATTACCGGG
GCAGCTCGAA CGGCGATGGC CATCAACGGT TCGCTGCCAG GACCAATACT CCGTTGGCGC
GAAGGCGACA CGGTCACGCT ACGGGTTCGC AACCGCTTGA AGCAGGACAC GTCCATCCAC
TGGCACGGCA TCATCCTGCC GGCGAATATG GACGGCGTGC CGGGTCTAAG CTTCCATGGC
ATCGCTCCCG ACGGCATGTA CGAGTACAAG TTCAAGGTCC ACCAGAACGG CACCTACTGG
TACCACAGCC ATTCGGGCTT CCAGGAGCAG GTCGGTGTTT ACGGTGCGCT GGTGATTGAT
GCCAAGGATC CAGAGCCTTT CACCTACGAT CGTGACTATG TCGTCATGCT GAGTGATTGG
ACCGACGAAG ACCCGGCGCG GGTTATGTCC AAGCTCAAAA AACAGTCGGA CTATTACAAC
TTCCACAAGC GCACCGTTGG CGACTTCGTC GACGACGTGA GCGAGAAAGG TTGGTCTGCT
GCTGTGGCCG ATCGAAAGAT GTGGGCCGAG ATGAAGATGA GCCCAACCGA TCTCGCTGAC
GTGAGCGGGC ACACCTACAC CTACCTCATG AACGGCCAGG CGCCAAATGG GAACTGGACG
GGAATCTTCA AGCCAGGGGA GAAAATCCGG CTTCGCTTTA TCAATGGCTC GGCGATGACC
TATTTCGACG TGCGGATCCC CGGCTTGAAA ATGACGGTTG TCGCAGCCGA CGGTCAGTAC
GTTAAGCCAG TGTCGATCGA TGAATTCCGG ATTGCCGTTG CTGAAACCTA CGATGTCATT
GTCGAGCCTG AAAACGAGCA GGCTTACACC ATCTTTGCTC AATCCATGGA TCGCACCGGC
TATTCAAGGG GTACCTTGGC TGTCCGTGAG GGCCTGCAGG CACCGGTGCC GGCTGTAGAT
CCAAGGCCTC TCATCTCCAT GAGTGATATG GGGATGGACC ACGGCAGCAT GGGTGGCATG
GATCACGGCA GCATGGCCGG TATGGACCAC AGCAAGATGG CTGGCATGGA CCACGGCAGC
ATGGCCGGTA TGGACCATAG CAAGATGGCT GGCATGGACC ACGGCAGCAT GGCCGGTATG
GACCATAGCA AGATGGCTGG CATGGACCAC GGCAGCATGG CCGGTATGGA CCATAGCAAG
ATGGCTGGCA TGGACCACGG CAGCATGGCC GGTATGGACC ATAGCAAGAT GGCTGGCATG
GACCACGGCA ACATGACCGG TATGGACCAA AGCAATATGG CCGCCAGCGG TGCCATGCAG
AACCATCCCG CCTCCGAAAC AAACAACCCT CTGGTCGATA TGCAGACCAT GACCCCTACG
CCAAAGCTGA GCGATCCGGG GATCGGGCTT CGCGATAACG GGCGTCGGGT TCTCACGTAT
TCGGATTTGC GTAGCACCTT CATCGACCCT GACGGCCGGG AACCTGGCCG GACAATCGAA
CTGCACCTTA CCGGGCATAT GGAAAAGTTC GCTTGGTCCT TCGATGGGAT CAAGTTTTCT
GACGCAGAGC CGCTGCGGCT CAAGTACGGC GAGCGCCTGC GTATTACCTT GGTCAACGAC
ACCATGATGA CTCACCCCAT CCATCTGCAC GGCATGTGGA GTGACCTGGA GGATGAGGAC
GGCAATTTCA TGGTGCGAAA ACACACGATC GATATGCCGC CTGGCTCGAA ACGAAGCTAT
CGCGTAACCG CAGATGCACT CGGGCGCTGG GCCTATCACT GTCACCTCAT GTACCACATG
GAGATGGGCA TGTTCCGAGA AGTCCGCGTG GACGAATGA
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| Protein sequence | MQSKTTRRSF VKGLAATGLL GGLGMWRAPV WAVTSPGQPN VLTGTDFDLY IGELPVNITG
AARTAMAING SLPGPILRWR EGDTVTLRVR NRLKQDTSIH WHGIILPANM DGVPGLSFHG
IAPDGMYEYK FKVHQNGTYW YHSHSGFQEQ VGVYGALVID AKDPEPFTYD RDYVVMLSDW
TDEDPARVMS KLKKQSDYYN FHKRTVGDFV DDVSEKGWSA AVADRKMWAE MKMSPTDLAD
VSGHTYTYLM NGQAPNGNWT GIFKPGEKIR LRFINGSAMT YFDVRIPGLK MTVVAADGQY
VKPVSIDEFR IAVAETYDVI VEPENEQAYT IFAQSMDRTG YSRGTLAVRE GLQAPVPAVD
PRPLISMSDM GMDHGSMGGM DHGSMAGMDH SKMAGMDHGS MAGMDHSKMA GMDHGSMAGM
DHSKMAGMDH GSMAGMDHSK MAGMDHGSMA GMDHSKMAGM DHGNMTGMDQ SNMAASGAMQ
NHPASETNNP LVDMQTMTPT PKLSDPGIGL RDNGRRVLTY SDLRSTFIDP DGREPGRTIE
LHLTGHMEKF AWSFDGIKFS DAEPLRLKYG ERLRITLVND TMMTHPIHLH GMWSDLEDED
GNFMVRKHTI DMPPGSKRSY RVTADALGRW AYHCHLMYHM EMGMFREVRV DE
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