| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0003 |
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| Symbol | dnaA |
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| ID | 5868002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1152 |
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| End bp | 2684 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641545076 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_001666255 |
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| Protein GI | 167031024 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGTGG AACTTTGGCA GCAGTGCGTG GAGCTTCTGC GCGATGAACT GCCTGCCCAG
CAATTCAACA CCTGGATCCG TCCGCTACAG GTCGAAGCCG AAGGCGACGA GTTGCGCGTC
TATGCGCCTA ACCGTTTCGT TCTCGATTGG GTCAATGAAA AATACCTAGG GCGCTTGCTC
GAGCTGTTGG GCGAAAACGG CAGCGGCATT GCACCTGCCC TTTCCTTATT AATAGGTAGC
CGCCGCAGTT CGGCTCCCCG GGCTGCGCCT AACGCGCCGG TCAGCGCCGC CGTGGCGGCC
TCGCTGGCGC AGACCCAGGC ACACAAAGCT GCCCCGACAC CAGCAGCGGT CGAGCCAATT
GCTGTGGCCG CAGCCGAGCC GGTGCTGGTC GACGAACTGG CCGAGCCGTC TTCACGTGAC
AGCTTCGATG CCATGGCCGA GCCCGCTTCG GCACCTGCCA GTAGTGGCCG CGCTGAACAG
CGCACCGTGC AGGTTGAAGG CGCGCTCAAG CACACCAGTT ACCTGAACCG TACCTTTACC
TTCGACACTT TCGTTGAAGG TAAGTCGAAC CAGCTGGCGC GCGCGGCTGC CTGGCAGGTG
GCGGACAACC CCAAGCATGG CTACAACCCG CTGTTCCTTT ATGGCGGCGT GGGCCTGGGT
AAAACCCACC TTATGCATGC TGTGGGTAAC CACCTGCTCA AGAAAAACCC GAATGCCAAG
GTGGTCTACC TGCATTCGGA GCGCTTCGTT GCGGACATGG TCAAAGCGCT GCAGCTCAAT
GCCATCAACG AATTCAAGCG TTTCTACCGT TCGGTGGATG CGTTGCTGAT CGACGATATC
CAGTTCTTCG CCCGCAAAGA GCGCTCGCAG GAAGAGTTTT TCCACACCTT CAACGCTCTG
CTTGAGGGTG GCCAGCAGGT GATCCTTACC TCTGACCGCT ACCCCAAAGA GATCGAAGGC
CTGGAAGAGC GGCTGAAGTC GCGCTTTGGT TGGGGCCTGA CGGTGGCTGT CGAGCCACCG
GAGCTGGAAA CCCGCGTGGC AATCCTGATG AAAAAGGCCG ACCAGGCCAA GGTCGAGCTG
CCGCATGATG CCGCGTTCTT CATTGCCCAG CGCATTCGCT CCAACGTACG GGAGCTGGAA
GGCGCACTGA AGCGGGTGAT TGCCCATTCG CACTTCATGG GCCGCGATAT CACCATCGAG
CTGATCCGTG AATCGCTGAA GGACCTGCTG GCGCTGCAGG ATAAATTGGT CAGTGTGGAT
AATATTCAGC GAACCGTCGC CGAGTACTAC AAGATCAAGA TCTCCGATCT GCTGTCCAAG
CGGCGTTCGC GTTCTGTCGC ACGGCCACGT CAGGTGGCCA TGGCCCTCTC CAAGGAGCTG
ACCAACCACA GCCTGCCGGA AATCGGCGAC ATGTTTGGTG GCCGCGACCA TACGACCGTG
CTGCACGCCT GCCGCAAGAT CAACGAACTG AAGGAATCCG ACGCGGACAT CCGCGAGGAC
TACAAGAACC TGCTGCGGAC GCTGACGACC TGA
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| Protein sequence | MSVELWQQCV ELLRDELPAQ QFNTWIRPLQ VEAEGDELRV YAPNRFVLDW VNEKYLGRLL
ELLGENGSGI APALSLLIGS RRSSAPRAAP NAPVSAAVAA SLAQTQAHKA APTPAAVEPI
AVAAAEPVLV DELAEPSSRD SFDAMAEPAS APASSGRAEQ RTVQVEGALK HTSYLNRTFT
FDTFVEGKSN QLARAAAWQV ADNPKHGYNP LFLYGGVGLG KTHLMHAVGN HLLKKNPNAK
VVYLHSERFV ADMVKALQLN AINEFKRFYR SVDALLIDDI QFFARKERSQ EEFFHTFNAL
LEGGQQVILT SDRYPKEIEG LEERLKSRFG WGLTVAVEPP ELETRVAILM KKADQAKVEL
PHDAAFFIAQ RIRSNVRELE GALKRVIAHS HFMGRDITIE LIRESLKDLL ALQDKLVSVD
NIQRTVAEYY KIKISDLLSK RRSRSVARPR QVAMALSKEL TNHSLPEIGD MFGGRDHTTV
LHACRKINEL KESDADIRED YKNLLRTLTT
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