| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_2396 |
|---|
| Symbol | |
|---|
| ID | 5877835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | - |
|---|
| Start bp | 2438686 |
|---|
| End bp | 2439537 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641542740 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_001663991 |
|---|
| Protein GI | 167041006 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000120764 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCAA TAGATCAACT ATACCAAAAA TTTTTAAATC TATATGATAT AAAAATATTA
AAAGTAACTT TCGATATCAT AAAAATTTTA GTTATAGCTT TTATAGGTAT AAAAATAGGG
GACATACTTA TATCAAGGTT TTACAAATTA CACACAAAAG GAAAAATACA GCTTCCTGAA
AGAAAGATAG GCACTTTAAT GTCCCTTACC AAAAATATAT TGAGATATGT CATTTATTTC
ATTGCGGTTG CTTCAATACT AAAAATTTTC AACATAGAAA TGACATCAAT ATTGGCAGTT
GCCGGAATTG GCAGTTTGGC TATAGGTTTT GGTGCTCAAA ATCTAGTCAA AGACGTGATT
TCTGGGTTTT TCATAATATT TGAAGATCAG TTTGGAGTTG GGGATTATAT AACGATAAAT
AATTTTTCGG GTCTTGTTGA AGAAGTAGGA CTTAGAATAA GCAAAATAAG GGATTTTTCA
GGCGATTTAC ATATAATACC AAATGGAGAA ATAAAGACTG TAACAAACCA TACACGAGGC
AGTATGAGAG CGCTTGTAAA TGTAGGTATT CCTTATGAGG AAGACGTTGA TAGAATAATA
AATGTGCTCA CTCAAATTTG TGAAGATATA AAAAAATCCA GGAATGATGT GATAGAGGGC
CCTACAGTTT TGGGAATTAC GGATTTTCAG GACTCGCAAG TTTTAATAAC GATTATTGCG
AAAACAGAGC CTATGAAACA ATGGGAAGTT GAAAGGGATA TAAGATACAG GATAAAAAAA
GTATTTGATA GAGAAAAGAT TACATTCCCG TATCCGCATA CAGATGTTAC AATAACAAAT
ATTGACACAT AA
|
|---|
| Protein sequence | MEAIDQLYQK FLNLYDIKIL KVTFDIIKIL VIAFIGIKIG DILISRFYKL HTKGKIQLPE
RKIGTLMSLT KNILRYVIYF IAVASILKIF NIEMTSILAV AGIGSLAIGF GAQNLVKDVI
SGFFIIFEDQ FGVGDYITIN NFSGLVEEVG LRISKIRDFS GDLHIIPNGE IKTVTNHTRG
SMRALVNVGI PYEEDVDRII NVLTQICEDI KKSRNDVIEG PTVLGITDFQ DSQVLITIIA
KTEPMKQWEV ERDIRYRIKK VFDREKITFP YPHTDVTITN IDT
|
|---|
| |