Gene Teth514_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_2227 
Symbol 
ID5877751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand
Start bp2229121 
End bp2230518 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content36% 
IMG OID641542580 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001663832 
Protein GI167040847 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00238209 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAA AACAGTACAA CAAATGGTTA ATTCTTTCTG CAGTTGTCAT TGGTAGCATA 
ATGGGGCCAA TTGACGGAAG TATAGTCAAC ATAGCAATGC CAGAATTTAC AAAGATTTTC
CACACAAATA TAACAACAGT AAGCTGGGTC TCCATGACAT ATTTATTAGT TTTAAGTAGT
CTAATGATGA CTTTTGGAAG ACTTGGCGAT ATGTTGGGTT ATAAAAAACT GTATCAATAC
GGCCTTTTGA CTTTTTCAAT ATCTTCTGCG ATCTTGAGTC TTTCTGTAAA TATATATATG
TTAATAATTA TGCGAGCTTT CCAAGCAATA GGAGCTGGCA TGCTAATGTC AATGACATCA
GCTATTATAA CATCCGTGTT TCCTCCAAAC GAAAGAGGTA AAGCTCTCGG CATTAACGCT
ATGTCTATAT CTATCGGGCT TGCAATAGGT CCTACATTAG GGGGTTTTCT TTTATCAAAT
TTGGGTTGGC AGTCTATATT TTATATAAAC GTTCCTATCG GTATAATAGG TTACATATGG
GCTCATATCG TGGTACCTGA CAACAAAGGA GTTCCTGAAA AATTTGATAT TTACGGATCT
ATTTCTTTCT TTGGCTTTCT TGCAAGCCTC TTGCTCTTTA TATCAGAAGG TGGAACATGG
GGTTGGACAT CACTTCCAAG TATAATTTCA TTATTGACAT CAGTAACATT TTTAACAATC
TTTGTAATTA TAGAAAATAA AGTAGACTTT CCTATGTTTG ACTTCTCTCT TTTAAAAATA
AGGTCTTTTA CCTTTGGAAA CATAAGCACC CTGCTAAACT TTATGTCTCA AAACACAATG
ACTTTTTTAA CTCCTTTCCT CCTTCAGCAT CTAGGATTTA CTACTGAAAA AGCAGGTATA
GTAATGACTT CTTTCCCTCT CGTCATGTTC GTCGTGGCAC CCTTAAGCGG TATTTTAGCT
GATAGATACG GAGCCCAAAT CCTCTCAACT ATTGGTGCAC TCATTTCTGC AACAGCCCTT
TTTCTTATGG TAACTTTAAC AGAAAAATCT ACTATGTTTT CCATTATGAC CCATCTTGCC
CTTTTTGGCG TAGGAAATGC CATTTTTCAG ACACCAAACA ACAGTGCAGT AATGGGAAGT
GCGCCAAAAA ACAGATTAGG GGTAGCCTCT GCCTTTCTCG CAACAATGAG AAATGTAGGA
ATGGTAATGG GCATTGCAGT AGGAAGCGCT ATATTTACAA ACAGGTTAAA AGTCTATCAA
GCTCTAAAAT TTTCTTCCAA CACTACCTTT ATGATGGCTA TTAAAGAAGC TTATATAGCC
GCCGGAATCT TTTCATTAAT ATGCGCCTTT ACTTCTCTTG TGAGAAATGA TGTTAAATTA
ATAAAAGGAA AGGATTGA
 
Protein sequence
MSQKQYNKWL ILSAVVIGSI MGPIDGSIVN IAMPEFTKIF HTNITTVSWV SMTYLLVLSS 
LMMTFGRLGD MLGYKKLYQY GLLTFSISSA ILSLSVNIYM LIIMRAFQAI GAGMLMSMTS
AIITSVFPPN ERGKALGINA MSISIGLAIG PTLGGFLLSN LGWQSIFYIN VPIGIIGYIW
AHIVVPDNKG VPEKFDIYGS ISFFGFLASL LLFISEGGTW GWTSLPSIIS LLTSVTFLTI
FVIIENKVDF PMFDFSLLKI RSFTFGNIST LLNFMSQNTM TFLTPFLLQH LGFTTEKAGI
VMTSFPLVMF VVAPLSGILA DRYGAQILST IGALISATAL FLMVTLTEKS TMFSIMTHLA
LFGVGNAIFQ TPNNSAVMGS APKNRLGVAS AFLATMRNVG MVMGIAVGSA IFTNRLKVYQ
ALKFSSNTTF MMAIKEAYIA AGIFSLICAF TSLVRNDVKL IKGKD