Gene Teth514_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_2154 
Symbol 
ID5876984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand
Start bp2157909 
End bp2158514 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content30% 
IMG OID641542509 
Productlytic transglycosylase, catalytic 
Protein accessionYP_001663762 
Protein GI167040777 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0579447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGGAAGA TTTGCAACAT AAATCATGAT ATCGGAGGAG TTACTTTGAG AAAAAAAGTT 
GCGGTAATAT TTTTGATACT ACTAGGTCTT TTGTTTACTT ACGAGTTAAA TACTTATTAT
TTTTTAAAAA AAATTTATCC TCTTAAATAC CAGAATTATG TAGTTTATTA CGCAAAAGAG
TATGGAGTAG ATCCCTATCT TGTTTTTGCC GTAATAAAAG TAGAAAGTAA TTTTAAAAGT
AATGCAATTT CCAGTAAAAA TGCTATAGGA TTAATGCAAA TTTTACCAGA GACTGGAGAG
TGGATTGCTA AAAAAATAGG GATAAAAAAC TACAGTAATA ATATGCTTTT TGAACCTAAA
TACAATATTC AAATGGGGAC ATGGTATTTG AGTTATCTTC TTAAAAATTT CAATGGGAAT
ATGCAGTTGG CTATAGCAGC TTATAACGGA GGTAGTGGAA ATGTAGATGC ATGGCTTAAA
GACAAAAAAT TTTCGAAGGA TGGGAAGCAG CTACATGCTG TTCCTTTTCC TGAGACAAAT
AGATATATAA AAAAGGTGTT AGCAGTTTAT CAGATGTATA AGTTCATATA TGAAACTAAA
AATTGA
 
Protein sequence
MGKICNINHD IGGVTLRKKV AVIFLILLGL LFTYELNTYY FLKKIYPLKY QNYVVYYAKE 
YGVDPYLVFA VIKVESNFKS NAISSKNAIG LMQILPETGE WIAKKIGIKN YSNNMLFEPK
YNIQMGTWYL SYLLKNFNGN MQLAIAAYNG GSGNVDAWLK DKKFSKDGKQ LHAVPFPETN
RYIKKVLAVY QMYKFIYETK N