Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_2035 |
Symbol | |
ID | 5875787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | - |
Start bp | 2044147 |
End bp | 2046114 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641542380 |
Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
Protein accession | YP_001663643 |
Protein GI | 167040658 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGATT TTATATCTTT TATGGAGAAA GCTTGGTGGA GATACGTTAA TGAGGGGGTA ATTACTGAAG GTGTTAAAGA AGAGATTAGA GAGTCATGGG AACTTTGTAA ATTCTATGGT GTAGACCCTT TTGGAGGCGT TGGGGAAATA TTGGATGAAG ATAATATGAA AATAAGGTTG AGGCAAAATG AGGATTTAAT ATCTGTTGCA CATCCTATTA TGGAAAATAT ATATAAACAA GTAACTGGTT CGGGCTTTTT GTTTGTTCTT GTAGACAGGG ACGGTTATCT TATCGATAGA ATTGGCGATG ATAGTATAAT GGGAGAGACG AGAAAATTAA ACTTTGTTGA GGGGGCTTTA TGGACAGAAG AAGCGGTAGG GACTAATGCG ATTGCTTTGG CTTTAAAACT TGATAAACCT ATACAACTGG TGGGAGCCGA ACATTATTGT ATTACCCATC ACATAGCTAC ATGTTCTGCA GCACCTATTC ATGATGAAAA CGGTAATATC ATAGGATGCC TTGATATGAC TGGATTAAAA GAGGATGCAC ACCCCCACAA TTTAGGTATT GTACTTGCTG GAGCTTATTC TATTGAAAAG CAGCTTGCGC TTATCAAGTC TCATAAACTT ATAGACGCTA CTTTTGATTC TATTCACGAA GGCATGCTTA TAATGGACCA TAATTTTGTT ATTCAAAGGG TTAACGAAAT AGCATTAAAG ATATTAAATA TTTCAAAGAA GGAAATTATA GGCATGCATA TACAGTCCAT ACTTGAAGAT GTGGATATAA TTGAAGATAT ACTAAGTCAG ACAGAACCCT ATTACGATGT TGAATGTATT TTTTATGGTC GAAACAAAAA AATACCATGT CGTATAAATG CTGTTCCTAT AGTAGCTAAC AGAAAAATTA TAGGTACGGT TGTAACTTTT AGAGAAGAGA AATATGTTCA TAATGTTGTT AATAAATTAG CAGGATTTAA AGCGAGTTAT ACATTTGAAG ATATAATCAC AAATGATGAA AATATGAAAA AAATCATAGA AACTGCTAAA AAAGCTGCGA AGAGTGATTG CAATATCCTT ATAGAAGGTG AAAGTGGGAC AGGTAAAGAA CTTTTTGCGC AGGCGATACA TAACTATAGT AAACGTTCAA AAGGGCCATT TATTGCAGTA AACTGTGCTT CTATACCCAG AGAATTAGTA GAAAGTGAAC TTTTTGGTTA CGAAAGAGGA GCGTTTACTG GGGCAAATAA AGAAGGTAAA CCTGGTAAAT TTGAACTAGC GGACAATGGA ACGATATTTT TAGATGAAAT TGGAGAGTTG CCCTATGAGG TGCAATCTAA ACTTTTAAGA GTGCTGGATA ACCATAAAAT TGTAAGGGTG GGTGGCACTG AGGAAAAGAA ATTGAATGTA AGGGTTATTG CGGCAACCAA CAGAAATTTA AGTGAAGAAG TGAATAAAAA GAATTTTAGA AATGATTTAT ATTATAGGAT AAATGTCATA AAAATAAACA TCCCTCCTTT AAGAGAGAGA AAAGGAGACA TTGAACTTCT TGCTAAAGTG TTTGTAGAAC GACTTAATAG ATATAATGCT TTAAGCGTTT CAGATTATAA GGTTTTAAGC GAATCGTTTA TAGAACGATT GATGAATTAC AACTGGCCAG GAAATGTTCG AGAGTTACAA AATGTTATTG ACAGGGCATA TTACCTTACG GAAGGCAAAG TAATTATCGA AGAGTATTTC CCTGAAAATA TAAGTGAAAA TAGTAATGCA CAACAGGAAA ATAATACTAC AATCTTTCCA ATTGAAGTTA TTGAAGAAAA AAACATAAGA GAAGCACTAA AAATAGCCAA GGGTAATATA TTGAAGGCAG CTGAAATGTT AAATTTGAGT AGAGCTACTA TTTATAGAAA GATAAAAAAA TACAATATAA GTGTAAAGGA ATTGCTGTCT CAAATTGAGA CTAAATAA
|
Protein sequence | MKDFISFMEK AWWRYVNEGV ITEGVKEEIR ESWELCKFYG VDPFGGVGEI LDEDNMKIRL RQNEDLISVA HPIMENIYKQ VTGSGFLFVL VDRDGYLIDR IGDDSIMGET RKLNFVEGAL WTEEAVGTNA IALALKLDKP IQLVGAEHYC ITHHIATCSA APIHDENGNI IGCLDMTGLK EDAHPHNLGI VLAGAYSIEK QLALIKSHKL IDATFDSIHE GMLIMDHNFV IQRVNEIALK ILNISKKEII GMHIQSILED VDIIEDILSQ TEPYYDVECI FYGRNKKIPC RINAVPIVAN RKIIGTVVTF REEKYVHNVV NKLAGFKASY TFEDIITNDE NMKKIIETAK KAAKSDCNIL IEGESGTGKE LFAQAIHNYS KRSKGPFIAV NCASIPRELV ESELFGYERG AFTGANKEGK PGKFELADNG TIFLDEIGEL PYEVQSKLLR VLDNHKIVRV GGTEEKKLNV RVIAATNRNL SEEVNKKNFR NDLYYRINVI KINIPPLRER KGDIELLAKV FVERLNRYNA LSVSDYKVLS ESFIERLMNY NWPGNVRELQ NVIDRAYYLT EGKVIIEEYF PENISENSNA QQENNTTIFP IEVIEEKNIR EALKIAKGNI LKAAEMLNLS RATIYRKIKK YNISVKELLS QIETK
|
| |