Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1966 |
Symbol | |
ID | 5878102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 1977170 |
End bp | 1978750 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641542314 |
Product | sigma-54 factor interaction domain-containing protein |
Protein accession | YP_001663578 |
Protein GI | 167040593 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAAAG CTTTTATTGA TTCTTTTATT GATTCTCTTA AAGAAACTTT TGGCGTTGTG ACCAATCTTC CGGAAAAATG TTTCTCATTT ATTTCACTTC CGAAAACAGG CTATCGTGTT TGGGCACCAC CCTGTACGCC CACTTGCCCG GAAGGCACTG CTTGCCCTTA TGAGCTAATA CTTTCCTTTA AACTAGAAGA AGATATTTTT GTGGTTGCAT TGCCTAAAAA CATTGATAGA GATTTAAAGC TAACACCCGC ATTCCTTGTT AAATTTCTTT TGACTGTATT GGAAATGTTA TATATTCCTG AACAAAAATC CGATAATTTG TTAATCGCGG AAGCATTGCA ATTTTTGGCA AATCAATTTA ATATAGAGTT TTTCCTTTTT GACAATAAAG GACAACTAAT TTTAAGTCAA ACTCATTCGC CTATCCAACT TTCTACCTTT ACCCTTTGGG AAAAGGTAAG TCAGACAGGT GAGCCAGAAG GTTTTATAAA AACCACATGG GGAAACTTTT ATTATCGTAT TTTTACAAAA GATGGAATAA CAACGGGTTC GATAGTCTGG AAAACAGAAC CAACCAAGCA GGAAGAAAAC AAATTCCTTT TTCACGACGA TTCTTTTTTT ACTATTCCAG GTAAAAACCC TCGTTTTTTA GAAATAAAAG ACCTTGTACG ACAAATCGCA GTAACCGACA GCACAGTACT ACTTCAAGGT GAAAGTGGCA CTGGTAAAGA ACTCTTTGCC CGCTATATTC ACTACTTAAG TCCTCGGAAA AACCATCCTT TTATTGCAAT AAACTGTGCT GCAATTCCCG ATAACCTTCT TGAAAGCGAA CTTTTCGGCT ACGAAGACGG CTCATTTACA GGTGCTCGTC GTGGCGGCAA GCCTGGTAAA TTTGAACTTG CTAATGGTGG AACAATTTTT CTTGATGAAA TTGGTGACAT GCCTCTACAA TTACAAGCAA AACTTTTACG GGTTTTGGAG AACCGACAAG TAGAAAGAAT TGGAGCTACT GTTTCCCGTC CAATTGATGT AAGAATTATT GCGGCAACTA ATAAAGATTT AAAAGAATTA ATTGATGCTA AACTGTTCAG AGAAGACCTA TTCTTCCGCT TAAATGTTTT TCCAGTTTTC ATACCACCAC TACGTGAGCG TCGAGATGAT ATACTTCTCC TTTTAGACTT TTATTTAAAA AATATTTGTC TTGAACAGGA TAAGCCATTT AAAATTTTCA GCCCAGAAGC TATTGAAATT CTTCAGAATT ATGACTGGCC AGGAAATATA CGAGAATTAA AAAATGTAGT AACTTACGCC GTCTCTATTT GTAAAGGTGA TATAATTACT CTGCATTATC TACCAAAGTA CTTACAAAAC GGTTTATCAT CCACTAAATC CCAGTTTGGT GAAGTTAAAA CTACTCATCC AATTATCCAG GTCGATCAAT TAAAAGATCA ATTAGAAATT CTATTAGCTA AATACGGTAA TTCTACCCAG TCCAAAAAGT TAATTGCCCA AGAGTTAGGT ATTAGTCTGG CAACTCTCTA TCGTTGGCTT AGAAAATACC ATCTAAGGTA G
|
Protein sequence | MRKAFIDSFI DSLKETFGVV TNLPEKCFSF ISLPKTGYRV WAPPCTPTCP EGTACPYELI LSFKLEEDIF VVALPKNIDR DLKLTPAFLV KFLLTVLEML YIPEQKSDNL LIAEALQFLA NQFNIEFFLF DNKGQLILSQ THSPIQLSTF TLWEKVSQTG EPEGFIKTTW GNFYYRIFTK DGITTGSIVW KTEPTKQEEN KFLFHDDSFF TIPGKNPRFL EIKDLVRQIA VTDSTVLLQG ESGTGKELFA RYIHYLSPRK NHPFIAINCA AIPDNLLESE LFGYEDGSFT GARRGGKPGK FELANGGTIF LDEIGDMPLQ LQAKLLRVLE NRQVERIGAT VSRPIDVRII AATNKDLKEL IDAKLFREDL FFRLNVFPVF IPPLRERRDD ILLLLDFYLK NICLEQDKPF KIFSPEAIEI LQNYDWPGNI RELKNVVTYA VSICKGDIIT LHYLPKYLQN GLSSTKSQFG EVKTTHPIIQ VDQLKDQLEI LLAKYGNSTQ SKKLIAQELG ISLATLYRWL RKYHLR
|
| |