| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1926 |
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| Symbol | |
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| ID | 5878014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | - |
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| Start bp | 1937315 |
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| End bp | 1939042 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641542276 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001663540 |
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| Protein GI | 167040555 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA AAATTGCTCG ATTTGTTAAC AAAAAAATAA TATTGTTCAG GGAAGAAGAC
CTAAATAGAA ATGGCAAAAT TAATTTTAAA AAGTATAATT ATATTATATT AACTTCTAAT
CGTTTACCTC AAAAAATAAT TCCAATATTA GAAAATGGGA ATACAGCTGA ACGTTTAGCT
ATAACATCCT TTTTGACAGT TAAGGAAAAC GAAGATATTG ATTTAGAAAG TTATAATGGG
GAAGTTTTTT TGGTGACTGA CGATTACAAT GAGATAAAAG GTGTTGTTAC AAATAGAGAA
ATAATCTTTT TCTTACTAGA TAATTTAAAA TCTATTAAGG CTGAATTTGA CCTTGTCAAA
ACTGACCTTG ACGCTTTTAT GGCGTGTTCA GACGATTTGG CCTGTATTAC AGACGGATCT
GGTTTAAAAG TGAGAATTAG CTCTTCTGCT GAAAAAATAT ATGGTTTAAA ACCGGAAGAT
CTCATAGGTA AAAATGTGAG TGAACTTGAA AAGAATGGTA TGTATTTTCC GTCAGCTACA
AAGATTGCTA TTGAGGAAAA AAAGAAAGTT ACTGTAATTC AAAAAACAAA GACAGGCAGA
AAATTATTAG TTACAGCTAC ACCATTTTTT GATAAAGATA ATAACATTAA AAGAATTGTT
AGTATATCAA AAGACATTAC AGACGAGGAA AAATTAAAGA CTGAGTTAAA ACAAACAAAA
GAATTACTTC AAAAATATGA AGAGGAACTA TCTTCACTTA GAATTGCCCA TCTTAAGAAT
TCTGAGATTA TCTATAGAAG TAAACAAATG GAAAGATTGA TAGAATTAGT AAATAAAGTC
GCACCTACAG AATCTACTAT TCTTATTTAT GGAGAAACAG GGGTAGGAAA GGAAGTTTTA
GCAAAATACA TTCATAATAT CAGCAGAAGT GAGGGACCAT TCATAAAAAT AAACTGTGGA
GCGATACCTG AGAATCTTTT AGAAGCAGAG CTGTTTGGTT ATGAGAAAGG GGCATTTACA
GGAGCAAAAA GCGAAGGTAA ACCGGGGCTT ATTGAAGTTG CAGATAAGGG AACTTTATTA
TTAGATGAGA TTAGTGAACT GCCTTTATCA TTGCAAGTAA AATTATTAAG AGTTTTACAA
GAAAAAGAAT TTATTAGAGT AGGTGGTATA AAACCTATCA AAGTAGATGT ACGAATAATT
GCTGCTTCAA ATAAAGACTT AAAAGAATTG GTGAAAGAAG GAAAATTTAG ACAAGATTTA
TACTATAGAT TGAATGTAGT TCCTGTTACT ATACCTCCAT TAAGAGAGAG GGTTCAAGAT
ATACCTATAT TGGCTTATCA TTTTCTTAAT ATGTATAATG AGAAATACGG TCATTCCAAA
CAACTAACTA ATGAAGTAAT GGAAATATTT ATGAAGTATC CCTGGCCAGG TAATGTTCGT
GAATTAGAAA ATGTTATAGA AAGAATTGTG ATAATTTCTG AAAATGATCA GATAACAAAA
AAAGATTTAC CTGGAGAATT ACTTAACCAA GAAGAAACAA ATCACTCTTT TGGAGTGCAT
GTTTCCAGAT TGATGCCATT AAAAGAGGCA AGTGCTCTTG TAGAGTATCA GCTTATAAAA
CAAGCCATAG AAGAATGTGG AAGCAGTTAT AAGGCAGCGG AAGTATTAGG AGTAGATCAA
TCTACAATAA TAAGGAAACT AAAGAAATAC GAGTCAATGT TATCATAA
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| Protein sequence | MKEKIARFVN KKIILFREED LNRNGKINFK KYNYIILTSN RLPQKIIPIL ENGNTAERLA
ITSFLTVKEN EDIDLESYNG EVFLVTDDYN EIKGVVTNRE IIFFLLDNLK SIKAEFDLVK
TDLDAFMACS DDLACITDGS GLKVRISSSA EKIYGLKPED LIGKNVSELE KNGMYFPSAT
KIAIEEKKKV TVIQKTKTGR KLLVTATPFF DKDNNIKRIV SISKDITDEE KLKTELKQTK
ELLQKYEEEL SSLRIAHLKN SEIIYRSKQM ERLIELVNKV APTESTILIY GETGVGKEVL
AKYIHNISRS EGPFIKINCG AIPENLLEAE LFGYEKGAFT GAKSEGKPGL IEVADKGTLL
LDEISELPLS LQVKLLRVLQ EKEFIRVGGI KPIKVDVRII AASNKDLKEL VKEGKFRQDL
YYRLNVVPVT IPPLRERVQD IPILAYHFLN MYNEKYGHSK QLTNEVMEIF MKYPWPGNVR
ELENVIERIV IISENDQITK KDLPGELLNQ EETNHSFGVH VSRLMPLKEA SALVEYQLIK
QAIEECGSSY KAAEVLGVDQ STIIRKLKKY ESMLS
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