Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1926 |
Symbol | |
ID | 5878014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | - |
Start bp | 1937315 |
End bp | 1939042 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641542276 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001663540 |
Protein GI | 167040555 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA AAATTGCTCG ATTTGTTAAC AAAAAAATAA TATTGTTCAG GGAAGAAGAC CTAAATAGAA ATGGCAAAAT TAATTTTAAA AAGTATAATT ATATTATATT AACTTCTAAT CGTTTACCTC AAAAAATAAT TCCAATATTA GAAAATGGGA ATACAGCTGA ACGTTTAGCT ATAACATCCT TTTTGACAGT TAAGGAAAAC GAAGATATTG ATTTAGAAAG TTATAATGGG GAAGTTTTTT TGGTGACTGA CGATTACAAT GAGATAAAAG GTGTTGTTAC AAATAGAGAA ATAATCTTTT TCTTACTAGA TAATTTAAAA TCTATTAAGG CTGAATTTGA CCTTGTCAAA ACTGACCTTG ACGCTTTTAT GGCGTGTTCA GACGATTTGG CCTGTATTAC AGACGGATCT GGTTTAAAAG TGAGAATTAG CTCTTCTGCT GAAAAAATAT ATGGTTTAAA ACCGGAAGAT CTCATAGGTA AAAATGTGAG TGAACTTGAA AAGAATGGTA TGTATTTTCC GTCAGCTACA AAGATTGCTA TTGAGGAAAA AAAGAAAGTT ACTGTAATTC AAAAAACAAA GACAGGCAGA AAATTATTAG TTACAGCTAC ACCATTTTTT GATAAAGATA ATAACATTAA AAGAATTGTT AGTATATCAA AAGACATTAC AGACGAGGAA AAATTAAAGA CTGAGTTAAA ACAAACAAAA GAATTACTTC AAAAATATGA AGAGGAACTA TCTTCACTTA GAATTGCCCA TCTTAAGAAT TCTGAGATTA TCTATAGAAG TAAACAAATG GAAAGATTGA TAGAATTAGT AAATAAAGTC GCACCTACAG AATCTACTAT TCTTATTTAT GGAGAAACAG GGGTAGGAAA GGAAGTTTTA GCAAAATACA TTCATAATAT CAGCAGAAGT GAGGGACCAT TCATAAAAAT AAACTGTGGA GCGATACCTG AGAATCTTTT AGAAGCAGAG CTGTTTGGTT ATGAGAAAGG GGCATTTACA GGAGCAAAAA GCGAAGGTAA ACCGGGGCTT ATTGAAGTTG CAGATAAGGG AACTTTATTA TTAGATGAGA TTAGTGAACT GCCTTTATCA TTGCAAGTAA AATTATTAAG AGTTTTACAA GAAAAAGAAT TTATTAGAGT AGGTGGTATA AAACCTATCA AAGTAGATGT ACGAATAATT GCTGCTTCAA ATAAAGACTT AAAAGAATTG GTGAAAGAAG GAAAATTTAG ACAAGATTTA TACTATAGAT TGAATGTAGT TCCTGTTACT ATACCTCCAT TAAGAGAGAG GGTTCAAGAT ATACCTATAT TGGCTTATCA TTTTCTTAAT ATGTATAATG AGAAATACGG TCATTCCAAA CAACTAACTA ATGAAGTAAT GGAAATATTT ATGAAGTATC CCTGGCCAGG TAATGTTCGT GAATTAGAAA ATGTTATAGA AAGAATTGTG ATAATTTCTG AAAATGATCA GATAACAAAA AAAGATTTAC CTGGAGAATT ACTTAACCAA GAAGAAACAA ATCACTCTTT TGGAGTGCAT GTTTCCAGAT TGATGCCATT AAAAGAGGCA AGTGCTCTTG TAGAGTATCA GCTTATAAAA CAAGCCATAG AAGAATGTGG AAGCAGTTAT AAGGCAGCGG AAGTATTAGG AGTAGATCAA TCTACAATAA TAAGGAAACT AAAGAAATAC GAGTCAATGT TATCATAA
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Protein sequence | MKEKIARFVN KKIILFREED LNRNGKINFK KYNYIILTSN RLPQKIIPIL ENGNTAERLA ITSFLTVKEN EDIDLESYNG EVFLVTDDYN EIKGVVTNRE IIFFLLDNLK SIKAEFDLVK TDLDAFMACS DDLACITDGS GLKVRISSSA EKIYGLKPED LIGKNVSELE KNGMYFPSAT KIAIEEKKKV TVIQKTKTGR KLLVTATPFF DKDNNIKRIV SISKDITDEE KLKTELKQTK ELLQKYEEEL SSLRIAHLKN SEIIYRSKQM ERLIELVNKV APTESTILIY GETGVGKEVL AKYIHNISRS EGPFIKINCG AIPENLLEAE LFGYEKGAFT GAKSEGKPGL IEVADKGTLL LDEISELPLS LQVKLLRVLQ EKEFIRVGGI KPIKVDVRII AASNKDLKEL VKEGKFRQDL YYRLNVVPVT IPPLRERVQD IPILAYHFLN MYNEKYGHSK QLTNEVMEIF MKYPWPGNVR ELENVIERIV IISENDQITK KDLPGELLNQ EETNHSFGVH VSRLMPLKEA SALVEYQLIK QAIEECGSSY KAAEVLGVDQ STIIRKLKKY ESMLS
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