| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1794 |
|---|
| Symbol | |
|---|
| ID | 5877453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | - |
|---|
| Start bp | 1803938 |
|---|
| End bp | 1804819 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641542144 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001663415 |
|---|
| Protein GI | 167040430 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0357708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG AAAATATTGC AAACTTTTAT TATGATTACA TTCAGCCTTT ATTAACAAAT
AAAAAATCTT TAATTGGGTT AATGATATTG CTATTTTATA TATTGATGGC TACAATAGGT
CCTGTTGTAG TACCTTTAGA TATGAATTCT AACTTTGCAG AAAGGTATCA AAAACCTTCT
TTGAAACATC CTTTTGGGAC AGACTATTTT GGAGTAGATA TTTTCCAACA AATTGTACAC
GGTTCTAGGT CTGTTATTTC TCTTACTTTA TTAGCAAGTT TTTTTGCTGT GCTAATAGGA
ACGGTTATTG GTGTTGCAAG AGGGTATTTA GAAGGGATTG CTGGTAAAAT CATTGATGCT
ATTATTATGG TTTTTCTAGT AATTCCGTCA TTTCCTGCTC TATTGATTCT AGCTGCTATA
TTTGTTAATT ACAACCTTAA TGTTGTTGAA ATAGCTCTAT TAGTTTCTAT ATGGTTATGG
GCACCATTGG CGAAACAAAT ATCAGCTCAG GTTTTATCTA TTAAATCAAA AGAATTCATA
GAAGCGTCAA AAATGCTTAA TATGCCGCTT AGTTATATTT TATTCAGTGA TATTGCAAAA
CTTTTAATTC CTTATATTTT CATAAATTTT GTCATGCAGA TAAAAGGAGC TATGGAGTTT
TCAGTAGGAC TTATGTTTTT AGGACTAGCC AAGTTTGATC CTACCCATTG GGGAATCATG
TTAAATTATG CTTTATACCA AGCGGGAGCC TTGTATACTG CTAAAGGGTT TCACTATTTA
TTCTTTATAA TTTTAAATAT AGTATTACTA ATTTACGGCG GAATATTGTT ATCACAAGGG
GTTGAAGAAG TTTTCAACCC ACGGCTTAGG GGGAATGAAT AA
|
|---|
| Protein sequence | MKKENIANFY YDYIQPLLTN KKSLIGLMIL LFYILMATIG PVVVPLDMNS NFAERYQKPS
LKHPFGTDYF GVDIFQQIVH GSRSVISLTL LASFFAVLIG TVIGVARGYL EGIAGKIIDA
IIMVFLVIPS FPALLILAAI FVNYNLNVVE IALLVSIWLW APLAKQISAQ VLSIKSKEFI
EASKMLNMPL SYILFSDIAK LLIPYIFINF VMQIKGAMEF SVGLMFLGLA KFDPTHWGIM
LNYALYQAGA LYTAKGFHYL FFIILNIVLL IYGGILLSQG VEEVFNPRLR GNE
|
|---|
| |