Gene Teth514_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_1790 
Symbol 
ID5877212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand
Start bp1799896 
End bp1801779 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content35% 
IMG OID641542140 
Productglycoside hydrolase family protein 
Protein accessionYP_001663411 
Protein GI167040426 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3934] Endo-beta-mannanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAT TTGCAGATGA ATTTATAATA GGAGCTAATT ATTGGCCAAG AAATCACGGC 
ATTGAAATGT GGAAAGAGTG GAATTATGAT GAGATAAAAA GTGAATTTAT TGAGGCGAAA
AGCTTAGGCA TTAATGTAAT GAGAATAAAT CTTTTTTGGG AGGATTTCCA GCCAAAGCCT
GATGTAATAT CAGAGGAAGC GGTGAAAAAG TTTGACGAGC TTATTAAGAT ATGTCATGAA
GTCGATATGA AAATCGCGCC TACTTTTTTT GTGGGGCATA TGAGCGGTGA GAATTGGGAT
GTGCCGTGGA GAGAAGGTAG GAATATATAC AGTGATTCAT TTATGTTGAG GTATCAAATT
AAATTGGTAC GCTTTTTTGC TGAGAGGTAC AAAGATGAAT CTGCTATTTT GTTTTGGGAC
CTTTCAAATG AGCCAGATAA TTATGTAAAA GCAGAGTCAA GACATGATGC TTGGCTGTGG
AACTATGTCT TATCAAATGA GATAAAAAAA TACGACAAAA ATCATCCCGT AACGCTTGGA
ATACACCAGG CATCTCTTCT TACTGATAAT AATTTTTATC CTGAAGACAT GCAAGAAGGC
AACGATTTTC TATGTATGCA CGCATATCCA ATTTATACAG ATACATGTAT AGACCCTGTA
AATTCTATAA GAAGCACTTA TATGGCACCT TTTGCTTCTA AACTCACCCA AGCTATGGGT
GGCAAAGAAG TGCTACTGGA GGAATTTGGT GCAACTACAC TTATGATGAG TGAAGATATA
GAGGGAGATT ATTACAAGGT GGTTCTGTAT AGCCTTCTTG CGAATGAATC GATAGGTGCA
ATAGCCTGGT GCTTTGGAGA TTTTTCTGTT GGCGAAAGGC TTCCCTATAA TTCTACCCCC
TTTGAAACGC AATTTGGTAT AACAGCAGTT GATGGAAGAG TTAAAAAAGC AGGACTTGAA
ATAAAAGCTT ATTCTGAATT TATGAATAGA ATTGAGTATA AGGACTTAAA ACACAAAAAG
TGCGATGCCG CGATAATCAT TCCGGATAAG TATTATAGTG CTTTATTTGT AGGTAACGAT
TATACTCCAG AGAGAAATTT TAGGATTCTT TTAAATAGTT TTATACTGGC AAAGGAAGCA
GGTATAGACG TTGAATTGGC AAGAGCTGAT GGAGATTTTA GTAAGTATAA AATGCTTATA
CTGCCTTCCG CTTATAGAAA AGGGCATTTA AATTATGACC AATGGGTAAA AATTATGGAT
TTTGTTAAAA ATGGTGGCAC TTTGTATGTA TCATACGATG GAATTTCTTT AGAAGGTTTT
GATGAGGTTT TTGGAGTTAA AACGCAATAT TCTATGGTGC CCAAAAATGA GACAGTATCA
ATGCATTGTG AAGAACTTGG AATTGATTTA AATTATAAAG CTCTTAAATT TAATAAAAGA
CTTATTGCAA AACCGACAAC GGGCCGTGTA ATTGCAAATG ATGATGAGAA TAACCCGGCA
ATAGTTGTGA ATAAATATGG CGAAGGGAAT GCTATTCTTG TTACGTATCC TATTGAGCTC
TATTTAAGTT ATATGCCCGA TGTATATAAG ACTGACAGGT CTTATTTGAT TTATAAGTAT
GCTAAAGAGC TGAGCGGAAT AGAATACAAC GTAAAAGTAG AATCTCCTTA TATTGAAGTA
AAAGAGTTTG ATTATGGCGG GAAAACCCTT GTGCTCTTTA TAAATCATGA AGACATAGAT
ATTCATACTA AAATAAGAAT AAGTAGAAAA ACAAAAAATA ATGAGAAAAT ACAAGATTTA
ATTAGCGGAA GACAGATTAA TTTAGAAAAT TTCACAATAG AGGCTAATGG AGTAGTTGCA
ATTTTGCTGG AAAAGGGGTT ATAA
 
Protein sequence
MAKFADEFII GANYWPRNHG IEMWKEWNYD EIKSEFIEAK SLGINVMRIN LFWEDFQPKP 
DVISEEAVKK FDELIKICHE VDMKIAPTFF VGHMSGENWD VPWREGRNIY SDSFMLRYQI
KLVRFFAERY KDESAILFWD LSNEPDNYVK AESRHDAWLW NYVLSNEIKK YDKNHPVTLG
IHQASLLTDN NFYPEDMQEG NDFLCMHAYP IYTDTCIDPV NSIRSTYMAP FASKLTQAMG
GKEVLLEEFG ATTLMMSEDI EGDYYKVVLY SLLANESIGA IAWCFGDFSV GERLPYNSTP
FETQFGITAV DGRVKKAGLE IKAYSEFMNR IEYKDLKHKK CDAAIIIPDK YYSALFVGND
YTPERNFRIL LNSFILAKEA GIDVELARAD GDFSKYKMLI LPSAYRKGHL NYDQWVKIMD
FVKNGGTLYV SYDGISLEGF DEVFGVKTQY SMVPKNETVS MHCEELGIDL NYKALKFNKR
LIAKPTTGRV IANDDENNPA IVVNKYGEGN AILVTYPIEL YLSYMPDVYK TDRSYLIYKY
AKELSGIEYN VKVESPYIEV KEFDYGGKTL VLFINHEDID IHTKIRISRK TKNNEKIQDL
ISGRQINLEN FTIEANGVVA ILLEKGL