Gene Teth514_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_1768 
Symbol 
ID5876753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand- 
Start bp1771948 
End bp1772496 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content28% 
IMG OID641542115 
Product2'-5' RNA ligase 
Protein accessionYP_001663390 
Protein GI167040405 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000411765 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACGT TTATTGGAAT TGATTTAGAT GAAAAATCAA TAGGGAAATT ATCAAGTTTT 
CAGGAAGAGT TAAAAAATTA TACGATAAAA GGAAGATGGA CTCATAAAGA TAATTTCCAT 
ATTACTTTAA AATTTCTAGG GGAAATAGAA ACAGAAAGTG TAATGAAAAT AAAAGACTCT 
CTTGAAGTAG CAGTAAAAGA TATTAGTCCC TTTTATATAA AATTTGACAA AGTAGGATTT 
TTTAAGGGAA ATGGCGATAT GCGAGTATTG TGGGTAGGTA CAGAAGAAAA TTCCTTTCTT 
AATAAACTGC ATGACAATAT AGATGAGGAA TTATATAAAA TTGGCTTTGA AAAAGATAAA 
AGAAAGTTTA CTTCCCACAT TACCATTGCC AGAGACATAC GTTTAAGCAT TGACATAGAA 
GAAGTAAATA GTCTTTTTGA AAAACAAGAA AAAGGAGCAA TTTTAGTAGA TACAGTTTTT 
TTGTATGAGA GTGTTATACA AGAAAATAGA AGAAAATATA TTCCTATATT TAGTGTGCCT 
TTAAAATAA
 
Protein sequence
MRTFIGIDLD EKSIGKLSSF QEELKNYTIK GRWTHKDNFH ITLKFLGEIE TESVMKIKDS 
LEVAVKDISP FYIKFDKVGF FKGNGDMRVL WVGTEENSFL NKLHDNIDEE LYKIGFEKDK 
RKFTSHITIA RDIRLSIDIE EVNSLFEKQE KGAILVDTVF LYESVIQENR RKYIPIFSVP 
LK