| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1709 |
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| Symbol | trmD |
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| ID | 5877099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | - |
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| Start bp | 1718781 |
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| End bp | 1719509 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641542056 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001663331 |
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| Protein GI | 167040346 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000353916 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGATTT TTGACGTTTT AACCCTATTT CCTGAAATGT TTGATAGTGT TTTATCCTAT
AGTATATTGA AAAGGGCTAT TGAAAAAGGA AAAATAAAAG TTAATTTGAT AAATATAAGA
GATTTTTCAA AGGATAAACA CAAAAGAGTA GATGATTATC CTTATGGAGG CGGGCCAGGA
ATGGTGATGA TGCCTCAGCC TCTCTTTGAT GCAATTGAAT TTGTAAAAAG TCAAGGAAAT
ATCCCTGTAT ATTACCTTGG TCCTAAAGGT AAAATTTTTA ATCAGGAAAT GGCGGTTAAG
ATGTCTAAAT TAGAAAGAAT AGCCCTTTTG TGTGGCCACT ATGAAGGAAT AGATGAAAGA
GTCTATTCTG TCATTGATGA AGAAATTTCT TTAGGAGATT TTATATTGAC AGGCGGAGAG
ATAGCCGCCA TGGCTATCAT TGACGCTGTA ACAAGACTTA TTGAAGGAGT ACTTTCACAC
TCTCAAAGTG CTATAGAAGA ATCCTTTGCT AATAATTTAT TGGAATATCC ACAGTATACA
AGGCCAGAAG TTTTTAGAGG TATGAAGGTG CCAGAAATTT TACTAAGTGG TAATCATGCC
GAAATAGCTA AATGGCGAAG GCAAAAGTCT TTAGAGATAA CTCTTTTAAA ACGGCCTGAT
TTGCTTAAAA AGGCTGTTTT GACTGAAGAA GATAAAAAGT TTTTAAGAGA AAAAGGGTTT
GACATTTAG
|
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| Protein sequence | MMIFDVLTLF PEMFDSVLSY SILKRAIEKG KIKVNLINIR DFSKDKHKRV DDYPYGGGPG
MVMMPQPLFD AIEFVKSQGN IPVYYLGPKG KIFNQEMAVK MSKLERIALL CGHYEGIDER
VYSVIDEEIS LGDFILTGGE IAAMAIIDAV TRLIEGVLSH SQSAIEESFA NNLLEYPQYT
RPEVFRGMKV PEILLSGNHA EIAKWRRQKS LEITLLKRPD LLKKAVLTEE DKKFLREKGF
DI
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