Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1652 |
Symbol | ispG |
ID | 5877910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | - |
Start bp | 1670754 |
End bp | 1671815 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641541999 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_001663274 |
Protein GI | 167040289 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA TTACTCGCGA AGTCAAAATA GGCAATAAAA AAATTGGAGG AAATAATCCA ATTTTAGTTC AGTCTATGAC TAACACGGAT ACCCACGATA TTGAAAAAAC AATAGAGCAG ATAAAAAGAC TAGAAGCTGA AGGCTGTGAT ATTATAAGAG TTGCTGTTCC AGATATGGAA GCAGCTGAAG CAATAAAAGA AATAAAGAAA AATATAAATA TTCCTTTGGT AGCAGATATT CATTTTGATT ATCGATTAGC TATAAAATCA ATTGAAAATG GAGCAGACAA GATAAGAATT AATCCCGGAA ACATAGGAAG AGAAGAAAAT ATCAAAAAAG TGGTAGAAAT AGCAAAAGAA AAAGGTATTC CTATTAGAAT AGGTGTAAAT TCTGGTTCTT TAGAAAAAGA AATATTACAT AAATACAAGG GAGTAACTGC CGAAGCAGTT GTGGAAAGCG CTTTAAAAAA TGTTTTAATT TTAGAAAAGT TAGGCTTTTA TGATATAGTT ATTTCGCTTA AAACTACAAA TGTACCCCTT ACTATAGAGG CTTATAAACT CGCTTCTTCA AAAGTGGATT ATCCATTGCA CGTGGGTATA ACGGAAGCGG GTACTATTGA AGCCGGTACT ATAAAATCTG CTATAGGAAT AGGAACATTA CTTTATTTAG GAATAGGAGA CACAATACGA GTTTCTTTAA CGGGTGATCC AGTCCATGAG GTGAGAGTAG GAAGACAGAT TTTACGTTCT TTAGGTCTTT TAAAAGAAGG AGTCGAAATC ATTTCCTGCC CTACCTGCGG CAGAACAAAA ATTGACTTGA TAAGGTTAGC AGAAGAAGTA GAAAAAAGGA CGAGGAATAT TAAAAAGCCC TTAAAAGTTG CTGTTATGGG ATGTGCTGTA AATGGACCAG GGGAAGCAAA AGAAGCAGAT ATAGGAATAG CAGGAGGAGA TGGAGAAGGA GTTATTTTTA AAAAAGGAAA AGTTTATAAA AAAGTTAAAG AAGAAGAGTT AGTAGAAGAA TTGATGAAAG AAATTGAAAA ATTACTTGAG GAGGATTCTT AA
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Protein sequence | MRKITREVKI GNKKIGGNNP ILVQSMTNTD THDIEKTIEQ IKRLEAEGCD IIRVAVPDME AAEAIKEIKK NINIPLVADI HFDYRLAIKS IENGADKIRI NPGNIGREEN IKKVVEIAKE KGIPIRIGVN SGSLEKEILH KYKGVTAEAV VESALKNVLI LEKLGFYDIV ISLKTTNVPL TIEAYKLASS KVDYPLHVGI TEAGTIEAGT IKSAIGIGTL LYLGIGDTIR VSLTGDPVHE VRVGRQILRS LGLLKEGVEI ISCPTCGRTK IDLIRLAEEV EKRTRNIKKP LKVAVMGCAV NGPGEAKEAD IGIAGGDGEG VIFKKGKVYK KVKEEELVEE LMKEIEKLLE EDS
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