Gene Teth514_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_1652 
SymbolispG 
ID5877910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand
Start bp1670754 
End bp1671815 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content33% 
IMG OID641541999 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_001663274 
Protein GI167040289 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA TTACTCGCGA AGTCAAAATA GGCAATAAAA AAATTGGAGG AAATAATCCA 
ATTTTAGTTC AGTCTATGAC TAACACGGAT ACCCACGATA TTGAAAAAAC AATAGAGCAG
ATAAAAAGAC TAGAAGCTGA AGGCTGTGAT ATTATAAGAG TTGCTGTTCC AGATATGGAA
GCAGCTGAAG CAATAAAAGA AATAAAGAAA AATATAAATA TTCCTTTGGT AGCAGATATT
CATTTTGATT ATCGATTAGC TATAAAATCA ATTGAAAATG GAGCAGACAA GATAAGAATT
AATCCCGGAA ACATAGGAAG AGAAGAAAAT ATCAAAAAAG TGGTAGAAAT AGCAAAAGAA
AAAGGTATTC CTATTAGAAT AGGTGTAAAT TCTGGTTCTT TAGAAAAAGA AATATTACAT
AAATACAAGG GAGTAACTGC CGAAGCAGTT GTGGAAAGCG CTTTAAAAAA TGTTTTAATT
TTAGAAAAGT TAGGCTTTTA TGATATAGTT ATTTCGCTTA AAACTACAAA TGTACCCCTT
ACTATAGAGG CTTATAAACT CGCTTCTTCA AAAGTGGATT ATCCATTGCA CGTGGGTATA
ACGGAAGCGG GTACTATTGA AGCCGGTACT ATAAAATCTG CTATAGGAAT AGGAACATTA
CTTTATTTAG GAATAGGAGA CACAATACGA GTTTCTTTAA CGGGTGATCC AGTCCATGAG
GTGAGAGTAG GAAGACAGAT TTTACGTTCT TTAGGTCTTT TAAAAGAAGG AGTCGAAATC
ATTTCCTGCC CTACCTGCGG CAGAACAAAA ATTGACTTGA TAAGGTTAGC AGAAGAAGTA
GAAAAAAGGA CGAGGAATAT TAAAAAGCCC TTAAAAGTTG CTGTTATGGG ATGTGCTGTA
AATGGACCAG GGGAAGCAAA AGAAGCAGAT ATAGGAATAG CAGGAGGAGA TGGAGAAGGA
GTTATTTTTA AAAAAGGAAA AGTTTATAAA AAAGTTAAAG AAGAAGAGTT AGTAGAAGAA
TTGATGAAAG AAATTGAAAA ATTACTTGAG GAGGATTCTT AA
 
Protein sequence
MRKITREVKI GNKKIGGNNP ILVQSMTNTD THDIEKTIEQ IKRLEAEGCD IIRVAVPDME 
AAEAIKEIKK NINIPLVADI HFDYRLAIKS IENGADKIRI NPGNIGREEN IKKVVEIAKE
KGIPIRIGVN SGSLEKEILH KYKGVTAEAV VESALKNVLI LEKLGFYDIV ISLKTTNVPL
TIEAYKLASS KVDYPLHVGI TEAGTIEAGT IKSAIGIGTL LYLGIGDTIR VSLTGDPVHE
VRVGRQILRS LGLLKEGVEI ISCPTCGRTK IDLIRLAEEV EKRTRNIKKP LKVAVMGCAV
NGPGEAKEAD IGIAGGDGEG VIFKKGKVYK KVKEEELVEE LMKEIEKLLE EDS