| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1590 |
|---|
| Symbol | |
|---|
| ID | 5877307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 1607734 |
|---|
| End bp | 1608597 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641541938 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_001663213 |
|---|
| Protein GI | 167040228 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA CAGATGATTT GATAAAAAGG ATACAAGATA ATTATACAAA ATTAAGCAAA
AGCCAAAAGA TAATAGCAGA GTACATTATA AATCATTATG ATAAGGCAGC TTTTATGACA
GCTGCAAAAT TGGGAGCCAG CATAAATATA AGTGAATCAA CTGTTGTAAG ATTTGCTAAT
ACTTTAGGCT ATAATGGATA TCCAGAACTT CAAAATGCAC TGCAAGAGCT TATAAAAAAT
AAACTTACAA CAGTCCAAAG GTTAGAAATG ACAGAAGAGA CAGATGAAAT TGCTATATTG
AATAATGTAC TAAAAGCCGA CATAGAAAAC ATAAAAGAGA CCATAAATGA AATAAATAAG
GATGACTTTA GAAGAGTCGT TTCAGATATC ATCAATGCTA CAAAAATTTA TATAATAGGT
TCCAGAAGTT CTATTGTCAT TGCAGAATAT TTGGGATTTT ATTTAAATTT AATACGGGAA
AATGTGTCAG TCGTTAAAGC GGGCGTATCA GATGTTTTCG AGCAAATTCT CAGAGTTAGT
GAAAATGATT TAGTGATAGG AATTGGTTTT CCGAGATACT CAAAAAGAAC ATTAGATGTG
CTGAAATATG CAAAATCTCA GAATGCAAAA ATCGTTACAA TAACAGATAG CTTGATTTCT
CCTCTTACCT CTGTTGCTGA TGAGATATTA ATTGCGAAAA GCAACATGGC TTCTTTTGTG
GATTCATTAG TGGCACCTTT AAGTCTTGTC AATGCTCTTG TGGTAGCTGT GGGCCTTAGA
GAAAAGGAAA AGATAGCCGA TACTTTTGAA AAATTAGAGA GTATTTGGGA TGAATATGGG
GTATATTTCT CAAAACCAAA TTAA
|
|---|
| Protein sequence | MAKTDDLIKR IQDNYTKLSK SQKIIAEYII NHYDKAAFMT AAKLGASINI SESTVVRFAN
TLGYNGYPEL QNALQELIKN KLTTVQRLEM TEETDEIAIL NNVLKADIEN IKETINEINK
DDFRRVVSDI INATKIYIIG SRSSIVIAEY LGFYLNLIRE NVSVVKAGVS DVFEQILRVS
ENDLVIGIGF PRYSKRTLDV LKYAKSQNAK IVTITDSLIS PLTSVADEIL IAKSNMASFV
DSLVAPLSLV NALVVAVGLR EKEKIADTFE KLESIWDEYG VYFSKPN
|
|---|
| |