| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1377 |
|---|
| Symbol | |
|---|
| ID | 5875678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | - |
|---|
| Start bp | 1418123 |
|---|
| End bp | 1418629 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641541727 |
|---|
| Product | PfpI family intracellular peptidase |
|---|
| Protein accession | YP_001663003 |
|---|
| Protein GI | 167040018 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.867663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGCTATCTT AATTGAGAAT ATGTATGAAG AGCCAGAACT ACTATATCCA
TACTATAGGC TCAAAGAAGA GGGATATGAA GTACATTTAA TAGGTCCAGA AAAAGACAAA
GTATATACAG GAAAACATGG ATATCCAATG AAAAGCACCC ATGCTTCTAA AGATGTAAAA
GCCGAAGATT ACGATGCGGT AATAATCCCC GGCGGTTATT CACCTGATCA TATGAGAAGA
TGTAATGACA CTATTAATTT TGTCAAAGAA ATGGACAAAC TGCAAAAAAC CATAGCAGCT
ATTTGCCATG GACCATGGAT TATGGCTTCC GCCTGCAATT TAAAAGGAAA AAAAGTTACA
AGCTTTTTCT CAATAAAAGA TGATTTAATA AATGCAGGAG CCCAGTATGT AGATGAAGAA
GTAGTTGTAG ATGGAAATTT AATAACCTCC AGAACTCCTA ACGATTTAGT AGCTTTTGTA
AAAGCTATAA TTGAAACGGT TAAATAA
|
|---|
| Protein sequence | MKKIAILIEN MYEEPELLYP YYRLKEEGYE VHLIGPEKDK VYTGKHGYPM KSTHASKDVK
AEDYDAVIIP GGYSPDHMRR CNDTINFVKE MDKLQKTIAA ICHGPWIMAS ACNLKGKKVT
SFFSIKDDLI NAGAQYVDEE VVVDGNLITS RTPNDLVAFV KAIIETVK
|
|---|
| |