| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1353 |
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| Symbol | |
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| ID | 5877664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 1389938 |
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| End bp | 1392106 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641541702 |
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| Product | ribonuclease R |
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| Protein accession | YP_001662979 |
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| Protein GI | 167039994 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00219332 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAATGA GCGTAAAAGA AAGACTTTTA GAATTAATGA GAGAAGAGAA TTATAAACCT
TCTAAAATAG AAGAAATAAT GAAAATATTA GGGATAGACT ATAGTCAAAA AAGCATTTTA
GAAAAAATAT TAAAAGAGAT GGAAAAAGAA GGCCTTGTTT TTAAAACAAA ACGAGGTAAA
TATGCTCTTC CTGAAAGATT AGATTTAGTA AAAGGTAAGA TTGAATTTCA TTCAAGAGGC
TATGGCTTTT TAATTCCCGA AGATAGCAAT ATAAAGGACA TATTCATACC TGTAAGTGGC
ATGAACGGTG CAATGCATGA CGATACTGTT TTAGTGAGAG TTACAAAAAG GGTGGATGGA
AAGAGCGAAG AAGGAGAAGT TGTAAAAATT CTCAAAAGGG CAAATACAAC TATTGTTGGA
ACTTACGAAA AAAGCAAAAA TTTTGGCTTT GTAGTGCCAG ACAACAAAAA GATCCATCAA
GATATATTTA TTCCTAAAGG AGAAGATAAA GGCGCTAAAA CAGGCATGAA AGTTGTAGCC
AGAATTACTA AATGGCCTGA AGGAAGGCGA AGTCCTGAAG GGGAGATTAT AGAAGTATTA
GGATACAAAG GTGACCCTGG CATAGATGTA ATGTCTATAA TACGGGCGTA TGATATTCCT
GAAGTTTTTC CTAAAGAGGT TTTAAAAGAA GCAGAAGAGA TACCGACAGA AATTCCTGAA
GAAGAGAAAA AGAGAAGAGT TGATTTGACT GATTTAGATT TTGTCACAAT TGATGGAGAA
GATGCAAAAG ATTTGGACGA TGCAGTATGT GTACAAAAAC TTCAAGATGG CAATTATCTT
CTGTATGTGA GTATTGCAGA TGTGAGCCAT TATGTGAAAG AAGGTTTGAA TTTAGATAAA
GAAGCATTAA AAAGAGGTTG TAGTGTATAT TTCATTGATA GAGTAATACC AATGTTGCCA
CCTAAGTTAT CTAATGGTAT TTGCAGTCTA AATCCGCAGG AAGAAAGACT GACTCTCACT
GTTAAAATGA AAATAAACTC TCAAGGAGAA GTTGTAGACC ATGAAATTTT TGAAAGCATT
ATAAAAAGCA AAGAGAGAAT GACATATACA AATGTTTACA AACTTTTAGA AGAAAATGAT
GAAGAATTAA AAAAGAGGTA TCAGTACCTA TTGGAAGATT TTAAACTAAT GAAAGAGCTA
GCTCTTGTTT TGCTAGAGAA AAGGAAAAGA AGAGGCAGTG TAGATTTTGA TTTTCCTGAA
GCTAAAGTAA TAGTAGACGA GAAAGGTAAA CCAATAGATG TTGTAAAAGT CGAAAGGAAT
ATAGCTCATA GGATAATTGA AGAATTTATG TTAGTAGCTA ATGAAACGGT AGCTGAGCAT
ATGCATTGGG TAAATGTACC ATTTGTTTAT AGAATACACG AACATCCGGA TATAGAGAAA
TTAATTGCTT TCAATAAATT TATTCACAAT TTGGGATACC ATATAAAAGG AATTGAAGGA
GGACAAATAC ATCCAAAGTC TTTGCAAGAG TTAATAAGAC AAGTGAGAGG AAAGAGTGAG
CAAAGAGTTG TAGAAACTTT GCTTTTAAGG TCTTTAAAAA GAGCAAGATA CAGTCCAGAA
GACATTGGCC ATTATGCTTT GGCGACCCAA TATTATACTC ACTTTACTTC CCCCATAAGG
CGATATCCTG ACCTTATAAT TCATAGGATA ATCAAAGAAT ACATAAATGG AAAATTAACA
AAAAAAAGGC AACGCCATTA CAACAGAATT TTAAATGACA TTGCTTTAAA ATCTTCTGAG
AGAGAAAGAG CAGCAGAAGC TGCAGAAAGA GAAATAGAAG AATTAAAGAA AGTAGAGTAC
ATGGCAGATA GAATAGGGAA TGTTTATAAA GGGATAATTT CCAACGTGAC AAATTACGGA
TTTTTTGTAG AACTTGACAA CACTGTGGAA GGGTTAGTAG ATGTTGCTTC ATTGGAGGAT
GACTATTACC ATTTTGATCC AGAAAGATAT GTTTTAATTG GTGAAAAGAG CAAAAAAGTT
TACTCTATAG GTAAAGAGGT TTATGTAAAA GTTGTTCATG TAGATGTGGA TAGGAGAGAA
ATAGACTTTG TTTTAGCAGA AGAAGAAAAA GATAATTTAG AGATTGGCTT AACCGAGCAT
AAAAGCTGA
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| Protein sequence | MGMSVKERLL ELMREENYKP SKIEEIMKIL GIDYSQKSIL EKILKEMEKE GLVFKTKRGK
YALPERLDLV KGKIEFHSRG YGFLIPEDSN IKDIFIPVSG MNGAMHDDTV LVRVTKRVDG
KSEEGEVVKI LKRANTTIVG TYEKSKNFGF VVPDNKKIHQ DIFIPKGEDK GAKTGMKVVA
RITKWPEGRR SPEGEIIEVL GYKGDPGIDV MSIIRAYDIP EVFPKEVLKE AEEIPTEIPE
EEKKRRVDLT DLDFVTIDGE DAKDLDDAVC VQKLQDGNYL LYVSIADVSH YVKEGLNLDK
EALKRGCSVY FIDRVIPMLP PKLSNGICSL NPQEERLTLT VKMKINSQGE VVDHEIFESI
IKSKERMTYT NVYKLLEEND EELKKRYQYL LEDFKLMKEL ALVLLEKRKR RGSVDFDFPE
AKVIVDEKGK PIDVVKVERN IAHRIIEEFM LVANETVAEH MHWVNVPFVY RIHEHPDIEK
LIAFNKFIHN LGYHIKGIEG GQIHPKSLQE LIRQVRGKSE QRVVETLLLR SLKRARYSPE
DIGHYALATQ YYTHFTSPIR RYPDLIIHRI IKEYINGKLT KKRQRHYNRI LNDIALKSSE
RERAAEAAER EIEELKKVEY MADRIGNVYK GIISNVTNYG FFVELDNTVE GLVDVASLED
DYYHFDPERY VLIGEKSKKV YSIGKEVYVK VVHVDVDRRE IDFVLAEEEK DNLEIGLTEH
KS
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