| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1288 |
|---|
| Symbol | |
|---|
| ID | 5875789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 1324803 |
|---|
| End bp | 1325660 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641541637 |
|---|
| Product | RluA family pseudouridine synthase |
|---|
| Protein accession | YP_001662917 |
|---|
| Protein GI | 167039932 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.543506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTAA TCGTTGGAGA AAATGAAAAG GGTGTTATAT TAGAAAATTT TTTGAGGAAC
AAAGGTTTTT CTAAAAGACT TATTAGAATT TATAAGTGGC AAGGAGAAAT ATTAGTAAAT
GGCGTAAAAG AAAATGTACA AAGAATTTTA CAACCAGGGG ATGTGATTGA TTTAATCCTT
CCTGAAAATG ATTCGAATAT TGCTCCGGAA AAAATGGGTT TGGATATATA TTACGAGGAT
GAGGAAATTT TAATTGTTAA TAAACCTGCT AATATGGTTG TTCATCCTAC CAAAAGATAT
CAGAGTGGGA CTCTTGCAAA TGGGGTAGCG TGGTATTTTA AAGATAAAGG AATAAAGGCT
TTGATTCGAC CTGTTAATCG CTTAGATAAG GGTACGTCGG GTCTGGTTGT ATTTGCCAAA
CGCCCTTTTA TGCAGTATTA TCTTCAAATT CTAAAGCCTA TGAGTAAACT TTATTTTGCA
GTAGTAGAAG GAAAAATGGA AGGGGAAGGT CGAATTGACC TTCCCATATC GAGAAAACCA
CAAAGTGGAA TTGAAAGAAT GGTATCCGAG GAAGGGGACA GAGCTATCAC CAATTACAAA
GTGGTAAAAA GCAGTAAAAG GTTTTCTCTC CTCAAGGTAA AAATTGAAAC AGGAAGAACT
CATCAAATAA GAGTTCATTT GAGCCATATT GGTCATCCTA TTGTAGGAGA TACATTGTAC
GGCTCTTCTG ATGATTATAT TAAAAGGCAA GCATTGCATG CATATAGACT TACTTTTGTA
CACCCTTTAG AAGAAAAAAG TATTTCTGTT TATTCACCTT TGCCACAAGA TATACAAAAT
TTACTAAAAT TATTCTAA
|
|---|
| Protein sequence | MRLIVGENEK GVILENFLRN KGFSKRLIRI YKWQGEILVN GVKENVQRIL QPGDVIDLIL
PENDSNIAPE KMGLDIYYED EEILIVNKPA NMVVHPTKRY QSGTLANGVA WYFKDKGIKA
LIRPVNRLDK GTSGLVVFAK RPFMQYYLQI LKPMSKLYFA VVEGKMEGEG RIDLPISRKP
QSGIERMVSE EGDRAITNYK VVKSSKRFSL LKVKIETGRT HQIRVHLSHI GHPIVGDTLY
GSSDDYIKRQ ALHAYRLTFV HPLEEKSISV YSPLPQDIQN LLKLF
|
|---|
| |