| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1269 |
|---|
| Symbol | |
|---|
| ID | 5877412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 1308133 |
|---|
| End bp | 1308543 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641541618 |
|---|
| Product | toxin secretion/phage lysis holin |
|---|
| Protein accession | YP_001662898 |
|---|
| Protein GI | 167039913 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4824] Phage-related holin (Lysis protein) |
|---|
| TIGRFAM ID | [TIGR01593] toxin secretion/phage lysis holin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAA TTTGGAGTTG GATACAAACT GCGTTTACTG TACTTGGTGG ACTTTTAGGA
TGGTTTTTAG GAGGTTTTGA TGGATTTTTA TATGCATTAG TGGCATTAAT GGTGGCTGAT
TATATCACCG GTGTCATGTG TGCCATTGTT GAAAAGAAAC TATCAAGTGA AATAGGGTTT
AAGGGCATAT TCAAAAAAGT ACTTATTTTT ATTCTAGTTG GAGTTGGACA TTTGATTGAT
ACAAATCTGA TCGGAGATGG GAGCGTGCTT CGGACTGCTA TCATCTTTTT CTATTGCTCC
AATGAAGGTG TATCTATGCT AGAAAATGCT GGTCGATTAG GACTACCAAT ACCAGAAAAA
TTAAAAGATA TCCTTGTTCA GTTGCATAAT AAAGGAGGTA AGGAATATTG A
|
|---|
| Protein sequence | MKEIWSWIQT AFTVLGGLLG WFLGGFDGFL YALVALMVAD YITGVMCAIV EKKLSSEIGF
KGIFKKVLIF ILVGVGHLID TNLIGDGSVL RTAIIFFYCS NEGVSMLENA GRLGLPIPEK
LKDILVQLHN KGGKEY
|
|---|
| |