Gene Teth514_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_1245 
Symbol 
ID5877083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand
Start bp1287128 
End bp1288411 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content46% 
IMG OID641541595 
ProductRNA-directed DNA polymerase (Reverse transcriptase) 
Protein accessionYP_001662875 
Protein GI167039890 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACAA AGAGAGCAGA GATAAGCGAA ATCATAGCTA AATACGGAAA AGTGCAGAAT 
CTGATAAGCT ATGTAAACCC CGAAACACTC AAAGCCAAGC ACGAGGAGAT GCCCAAAAAG
AAAGCGTCAG GAGTGGACAA AGTAACATGG GAAGAATACG ATGTGAACGT GGACGAGAAC
GTAGAAACGC TCATAGCGAA AATGAAGCGG TTCAGCTATC GACCCCAGCC CGCAAGACGA
GTCTACATCC CAAAAGCCAA CGGAAAGCTG AGGCCGCTGG GGATACCGTG TTACGAAGAC
AAACTGGTAG CAGCGGTTAT GGCAGACATA CTAAACGAAG TGTACGAAAA CATATTTCTA
GACACATCGT ACGGGTTCAG GCCAGGCAGG AGCTGTCACG ACGCAATAAA AGAACTCAAT
CGCATAATAG GGAGATGCAA AATAAGCTAT GTGCTTGAAG CGGACATCAA AGGATTCTTC
GATAACGTAG ACCAGAAACA GCTGATGGAG TTCATCGCAC ACGACATCGA CGATAAGAAC
TTCAGCAGGT ACATTGTCCG ATTTCTGAAA TCAGGGATAA TGGAAGAAGG CAAATACCAC
GAAAGCGACA AAGGGACAGC CCAAGGCTCG CCACTATCGC CGATACTAGC CAACATATAC
CTGCACTACA CGCTGGACGT ATGGTTTGCC TATCTCAAAA GAAACGGGAA GTTCAGGGGT
GAGGCATACA TAGTGCGATA TGCAGATGAC TTTGTGATGC TCTTTCAATA CAAGAGTGAC
GCAGATAAGA TGTACGAGGC GCTGCCAAAG AGGATGGCGA AATTCGGGCT GGAATTGGCG
ATGGACAAGA CGAAGATACT ACCATTTGGG AGATTCGCCA AACAAAACAG CAAAGACGGC
AAGACCGAAA CATTCGACTT TCTCGGCTTC ACATTCAGCA ACGGTACGAC CAGAAACGGC
AAATACAGAG CACACATCCA GACGAACAAG AAGAAGCTCA AAGCAAAAAG GCAAGTAGTA
AAGGCATGGC TCAAAGAGCA GCAACATGCG CCGGTAGCAG AAACATTCAA GAAACTGAAT
CAGAAACTGC AAGGGCATGT CAACTACTAT GGCATAAACG GGAACTCAAA GATGGTAGCA
AACTTCTTTA TGTACGTCAA AGAAACATTC ATAAAGATAT TGCGAGCCAG AGGGCAGAAG
CACCCGATAA AATGGGAAGA CTATCAGAGA ATGTGGGACT ACTATATCAA GCCGCCGAAG
GTCGTAGTCA ACATTTGGGT ATGA
 
Protein sequence
MGTKRAEISE IIAKYGKVQN LISYVNPETL KAKHEEMPKK KASGVDKVTW EEYDVNVDEN 
VETLIAKMKR FSYRPQPARR VYIPKANGKL RPLGIPCYED KLVAAVMADI LNEVYENIFL
DTSYGFRPGR SCHDAIKELN RIIGRCKISY VLEADIKGFF DNVDQKQLME FIAHDIDDKN
FSRYIVRFLK SGIMEEGKYH ESDKGTAQGS PLSPILANIY LHYTLDVWFA YLKRNGKFRG
EAYIVRYADD FVMLFQYKSD ADKMYEALPK RMAKFGLELA MDKTKILPFG RFAKQNSKDG
KTETFDFLGF TFSNGTTRNG KYRAHIQTNK KKLKAKRQVV KAWLKEQQHA PVAETFKKLN
QKLQGHVNYY GINGNSKMVA NFFMYVKETF IKILRARGQK HPIKWEDYQR MWDYYIKPPK
VVVNIWV