Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1019 |
Symbol | |
ID | 5875911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 1048994 |
End bp | 1049722 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641541373 |
Product | MIP family channel protein |
Protein accession | YP_001662654 |
Protein GI | 167039669 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACC TTGCAAAATA TGTTGCTGAA TTTTTTGGTA CTATGATACT TATTTGGTTA GGTGATGGCG TTGTTGCAAA CGTTGTCTTG AATAAATCTA AAGGGCAAAA TAGCGGCTGG ATTGTAATCA CAGCGGGATG GGGATTTGCA GTAATGGTAG CTGTTTATGT AGTTGGATGG ATAAGTGGTG CTCACATAAA TCCAGCTGTG ACTCTTGGTT TAGCAACGAT AGGGAACTTT CCATGGAGTT TAGTGCCAGG CTACATTATA GCACAAGTTT TGGGAGCTTT TGTGGGAGCC ATAATTGTTT ATTTGATGTA CATGGATCAT TTTGCTGCAA CTGATGATCC CACAGCTAAG CTTGGTACTT TTGCAACTAT TCCAGCTATA AGAAATTTGG GTAAGAATTT TATGACAGAG GCATTTGGTA CTGCCATGCT TTTAATAGGA ATACTTGGAA TTACTAATAG CAATAACTCT GTTGGAGGAA TGGGAGCGCT TTTAGTAGGA CTTCTCGTAT GGGCGATAGG TTTAAGCTTA GGTGGACCTA CAGGTTATGC AATTAATCCG GCGAGAGACT TCGGCCCGAG ACTAGCTCAT GCTGTTCTTC CTATTCCAGG TAAAGGGGAT TCTGATTGGG GATACGGCTT AATAGTTCCA ATATTTGGGC CGATAGTCGG AGGAATACTT GGAGCCATAG TTTACCAACT TATTGTGAAT ATACATTAG
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Protein sequence | MSDLAKYVAE FFGTMILIWL GDGVVANVVL NKSKGQNSGW IVITAGWGFA VMVAVYVVGW ISGAHINPAV TLGLATIGNF PWSLVPGYII AQVLGAFVGA IIVYLMYMDH FAATDDPTAK LGTFATIPAI RNLGKNFMTE AFGTAMLLIG ILGITNSNNS VGGMGALLVG LLVWAIGLSL GGPTGYAINP ARDFGPRLAH AVLPIPGKGD SDWGYGLIVP IFGPIVGGIL GAIVYQLIVN IH
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