| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0894 |
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| Symbol | rpsD |
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| ID | 5876296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 917863 |
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| End bp | 918483 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641541239 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001662532 |
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| Protein GI | 167039547 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000013906 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAGAT ATACAGGACC AACTTGCAGA TTGTGCAGAA GAGAAGGCAT GAAATTATAT
TTAAAAGGAG ATAAATGTTA TACAGACAAA TGTCCTTTTG CAAGAAGAGG ATATGCACCA
GGACAACATG GACAAGAAAA GAAAAAACTC ACTAACTACG GCATGCAACT ACGAGAAAAA
CAAAAACTCA AAAGGTACTA TGGCGTTTTA GAGAGACAGT TTGAAAGGCT CTATGAAGAA
GCAGAAAGAA TGAAAGGAAT TACAGGTGAA AACTTATTGC AGCTTTTAGA AAGACGTCTT
GACAATGTAG TGTTTAGATT GGGCTTTGCT GCGTCTAGAC CACAAGCTAG ACAATTGGTA
AGCCATGGAC ATATAGAAGT AAATGGTAAG AAAGTTGATA TACCATCTTT CTTAGTAAAA
CCAGGGGATG TAATATCTGT GAGGGAAAAA AGCCGTTCAA TGGAATTAAT AAAGAATAAT
TTAGAAGTAT CAAGAAACGT ACCTGACTGG TTAGAACTCA ATAAAGATGC TTTTGAAGGT
AGAGTAGTTT CATTGCCGAG AAGAGAACAT ATAGATCTGC CTATCCAAGA GCACTTGATT
GTTGAGTTAT ATTCTAAGTA A
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| Protein sequence | MGRYTGPTCR LCRREGMKLY LKGDKCYTDK CPFARRGYAP GQHGQEKKKL TNYGMQLREK
QKLKRYYGVL ERQFERLYEE AERMKGITGE NLLQLLERRL DNVVFRLGFA ASRPQARQLV
SHGHIEVNGK KVDIPSFLVK PGDVISVREK SRSMELIKNN LEVSRNVPDW LELNKDAFEG
RVVSLPRREH IDLPIQEHLI VELYSK
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