Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_0884 |
Symbol | rpsE |
ID | 5878041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 912761 |
End bp | 913264 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641541229 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001662522 |
Protein GI | 167039537 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.560186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGAG TTGATTGGAC AAAGTTAGAT TTAAAAGAAA GGGTTGTAAG CATAAATCGT GTTTCAAAAG TTGTAAAAGG TGGTAAAAAC TTTAGATTTA GCGTCACAGT AGTAGTTGGG GATGCAGAAA GGGGCTATGT AGGAGTAGGA AGAGGTAAAG CTGCAGAAAT CCCAGATGCA ATTAGAAAAG CTATAGAGGA TGCGAAAAAA CACTTAATTA AAGTTCCAAT TGTAGGAACT ACTATTCCTC ATGAAGTCAT AGGGGAATTT GGCGCTGGAA AAGTACTTTT GAAACCGGCA AGAGAAGGTA CTGGTGTTAT TGCAGGGGGA CCAGTTCGTG CTGTTTTGGA ATCTGCAGGT ATAAAAGACG TTTTAACTAA ATCACTTGGT TCTTCCAATG CAACTAATAT GGTTTATGCT ACAATCGAAG GATTAAAAAG GCTGAGAACA GCTGAAGATG TGGCAAAATT GCGTGGAATT CCTGTAAGCC AATTGTTTGA ATAA
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Protein sequence | MARVDWTKLD LKERVVSINR VSKVVKGGKN FRFSVTVVVG DAERGYVGVG RGKAAEIPDA IRKAIEDAKK HLIKVPIVGT TIPHEVIGEF GAGKVLLKPA REGTGVIAGG PVRAVLESAG IKDVLTKSLG SSNATNMVYA TIEGLKRLRT AEDVAKLRGI PVSQLFE
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