Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_0839 |
Symbol | ispD |
ID | 5876944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 876734 |
End bp | 877417 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641541184 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_001662478 |
Protein GI | 167039493 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00179079 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTAA GTGCGGTAAT AGTGGCGGCA GGTAAGGGCA TTAGAATGGG TCACACAGTA AATAAAGTAT ACCTTCCTAT AGCAGGTAAA CCAGTTTTGT ATTATTCTCT CAAAGCCTTT GATGAAATTG ATTGGATTAA GGAAATTGTT GTTGTTGTAT CAAAGGAAGA AATGGAATAT TGCCAAGAAA ATGTAGTAAA AAAGTATTTT TTCAAAAAAC CAATTAAATT AGTAGAAGGA GGTAGTGAAA GGCAGTATTC TGTTTATAAT GGAATTATAA ATACAGAGGG AGATTGCGAA ATTATAGCAA TTCATGATGG AGCAAGGCCT TTAATTGAGA AAGAAATAGT TATAAAAGCT TTAAAAGAAG CTTATTTGCA TAAAGCAGTA GCATTGGGAG TGCCTGTCAA AGACACTATA AAAGTAGTTG ATGGGAAAAA TTTTATTTTA AATACCCCTG ATAGAAAATA TTTATGGGCA ATTCAAACCC CTCAGGTATT TGAAAGGAAT TTGATTATTA AAGCTCATCA AAGGGCACTG GAGGATGGTT TTTTAGGGAC AGATGACACA GTATTAGTGG AGAGATTGGG TTATAAAGTG AAAGTAGTTG AAGGAGACTA TAGAAATATA AAGATTACTA CGCCAGAGGA TTTGATTGTG GCAGAAGCTT TTTTAAAAAA ATAA
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Protein sequence | MNVSAVIVAA GKGIRMGHTV NKVYLPIAGK PVLYYSLKAF DEIDWIKEIV VVVSKEEMEY CQENVVKKYF FKKPIKLVEG GSERQYSVYN GIINTEGDCE IIAIHDGARP LIEKEIVIKA LKEAYLHKAV ALGVPVKDTI KVVDGKNFIL NTPDRKYLWA IQTPQVFERN LIIKAHQRAL EDGFLGTDDT VLVERLGYKV KVVEGDYRNI KITTPEDLIV AEAFLKK
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