| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0655 |
|---|
| Symbol | |
|---|
| ID | 5875782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 683131 |
|---|
| End bp | 684873 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641541001 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_001662299 |
|---|
| Protein GI | 167039314 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTTTGG ATGTAATCAG TGTATCTAAG GCAAACTGCA AAAATTGCTA CCGGTGCGTT
AGGCATTGTC CTGTCAAAGC TATAAAAGTA GTCGGCGGTC AGGCGGAAGT TGTGGATAGC
TTATGTATAT ACTGTGGAAG GTGTGTCATC GAATGCCCCC AGAATGCCAA GAAAATACGG
AACGACCTAC ATGCAGTAAA AGAATTCATA AATGCCGGTG AAAAGGTTGT AGCCTCCATA
GCTCCTTCTT ACCCTGCTGT CTTTGACGTA ACTTCTCCTC AGGAGATGTT TTCCATACTG
AAGGCCCTAG GGTTTTATGG AGCTGAGGAA ACAGCGGTGG GAGCTGAAAT GGTATCTATG
GAGTACCAGC ATTTGATCAA AAAGGGGCAG AAGGGTCCCA TTATAACCAC GGCTTGCCCG
GTTGTAAAAA ATCTGGTAGA GAAATATTAT CCAGGACTTA TAAGGAATCT AGCTCCGGTG
GTTTCCCCGA TGGTTGCTCA TGCAAGGTCA TTGAAGCAAA GATATGGGTT GGACATTAAA
GTTGTTTTTA TAGGTCCCTG CATTGCCAAA AAAGCTGAAG CCCTAGATAG AAGCGTTTTA
GGGAACGTAG ATGCAGTACT AACTTTTCAA GAATTGGCCG ATTGGATAGA TGAGAAAGCT
TCCGCGGTAG CTGGAGTAGA CTTTGGAGAG CGAGAAAATG TATTAGAACC TTTTATTGCT
AGGAGTTATC CCTTGCCAGG GGGGCTTTTA AAGACTTCTT CAATGGAGGA TGACCTTTTG
TCCCGAGAGG TCGTAGTCGT AGACGGCATG GAGGACTGCA TGGAACTTTT AGATGCCCTG
GAGCGCGGAA GCGTAAGCGG CCGGCTCTTT GAGATGATGG CGTGCAGGGG CGGCTGTATC
AATGGGCCCT CGATGCCGTG TGACAGTTCC CTTTATGAAA GAAGGGAAAG GTTGCTTTCA
TTTATAGAAA ATAATCAACA GCAGCAGGGA TATGAGGATA TAAAGGCTTC TGCGGCGGGT
ATTGACCTCA GGAGGTCTTT CGAGCCGAAG GCCTTTAAAG CGCCTAGGCC AACCGAATCA
GAGATAAGAG AAATACTGGC TTCAATAGGC AAAACGACTC CAGAAAAGGA ACTGAACTGC
GGGGCATGCG GATATCCTTC CTGCCGCAAA AAAGCCGAGG CCGTCTACCG GGGAATGGCG
GAGCCGGACA TGTGTATCCC CTACATGAGG TCCAGGGCCG AATCTCTGGC CAACCTGATC
ATAGACCACA CCCCGAACGG CATCATTTTG GTAGACAGTA ATTTGAATAT AAAGGAAATA
AACAGAGCGG CGGAAAAAAT GTTCGGTGTT GAAAAGGAAC AGGTCCAGGG GAAGCCCCTT
TCCACCGTCA TCGACGACAG GGATTTTGCC TGGGTACTGG CCAATAAAAC TAACCTGCAG
GATAAAAAGG TGAACTATCC CCGGAATTTT TTAACTACCC TCCAGACTAT ATGCTATATC
GAGGAAGAGG ACCTGGTACT GGCGATTATT CAGGATATTA CCGAACAGGA AAAGCAGAGG
ATGGAACTGG AAAGGGTTAG GGAGGAGACC CTGGAGAAGG CCCAGGAAGT AATAAACAGG
CAGATGCGCG TGGCCCAGGA AATAGCAGGA CTGCTGGGAG AGACGACGGC GGAGAGCAAG
ATGCTGCTCC TTAAGCTTAT AGAACTGGTT AAAGGAAGGG AAGAAAATGA AGGTCTTTGC
TGA
|
|---|
| Protein sequence | MILDVISVSK ANCKNCYRCV RHCPVKAIKV VGGQAEVVDS LCIYCGRCVI ECPQNAKKIR
NDLHAVKEFI NAGEKVVASI APSYPAVFDV TSPQEMFSIL KALGFYGAEE TAVGAEMVSM
EYQHLIKKGQ KGPIITTACP VVKNLVEKYY PGLIRNLAPV VSPMVAHARS LKQRYGLDIK
VVFIGPCIAK KAEALDRSVL GNVDAVLTFQ ELADWIDEKA SAVAGVDFGE RENVLEPFIA
RSYPLPGGLL KTSSMEDDLL SREVVVVDGM EDCMELLDAL ERGSVSGRLF EMMACRGGCI
NGPSMPCDSS LYERRERLLS FIENNQQQQG YEDIKASAAG IDLRRSFEPK AFKAPRPTES
EIREILASIG KTTPEKELNC GACGYPSCRK KAEAVYRGMA EPDMCIPYMR SRAESLANLI
IDHTPNGIIL VDSNLNIKEI NRAAEKMFGV EKEQVQGKPL STVIDDRDFA WVLANKTNLQ
DKKVNYPRNF LTTLQTICYI EEEDLVLAII QDITEQEKQR MELERVREET LEKAQEVINR
QMRVAQEIAG LLGETTAESK MLLLKLIELV KGREENEGLC
|
|---|
| |