Gene Teth514_0538 details

Gene Information

• Locus tag: Teth514_0538
• ID: 5876039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermoanaerobacter sp. X514
• Kingdom: Bacteria
• Replicon accession: NC_010320
• Strand: +
• Start bp: 556674
• End bp: 558662
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 641540874
• Product: DNA ligase, NAD-dependent
• Protein accession: YP_001662182
• Protein GI: 167039197
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II)
• TIGRFAM ID: [TIGR00575] DNA ligase, NAD-dependent

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCCAA AAGAAAGGAT AAAGGAATTG AGAGAAAAAA TAAATTATCA CAATTACAGA 
TATTACGTTT TGGACCAACC AGAGATTTCA GACTATGAGT ACGACATGCT GATGAGAGAA 
CTTATAGAAT TAGAAGAAAA ATATCCAGAG CTTAAAACTC CAGACTCTCC ATCCCAAAGA 
GTAGGTGGGG AGCCTTTAAA AGAATTTGAG CCTTTTACCC ATGTAGTTCC AATGTTAAGT 
TTGGCTAATG CTTTTTCTGA GGGAGAACTT AGAGACTTTG ACAGAAGAGT AAGAGAGGCA 
GTGGGAGATG TAGAGTACGT AGTAGAATTA AAAATTGACG GCTTATCTGT GGAACTAATT 
TATGAAAAAG GCATATTTAC TGTGGGTTCT ACAAGAGGAG ACGGGATCGT AGGAGAAAAT 
GTCACACAAA ATTTAAAGAC TATAAAGTCA ATTCCTTTAA GGCTTAAGGA TGATGTAAGC 
CTTGTTGTAA GAGGAGAGGT CTTCATGCCC CGCGCTTCTT TTGAAAAATT AAATGAGGAG 
AGAGAAAAAT TAGGGGAAAG CCTTTTTGCA AATCCCAGAA ATGCTGCAGC AGGTTCTTTA 
AGGCAATTAG ATCCTAAAGT GACGGCGAAA AGAGATTTAG ACATTTTTAT TTTTAACCTT 
CAGAAGATTG AGGGTAGAAA ATTTAAAACC CACATAGAGA CATTAGAATT TTTGAATGAA 
CAGGGATTTA AAATAATACC AATTCATAAA AAATGTAGCA ATATAGATGA AGTAATAAAA 
GAAATAGAAG AGATAAGAAA CTTACGAGAT AAGCTGCCTT ACGACATTGA TGGAGCAGTT 
GTAAAAGTAA ATGACCTTGA AAAGAGAGAA ATTTTAGGCC AGACTGCCAA AGACCCCAGG 
TGGGCTATTG CTTTTAAATA TCCTGCAGAG AGGAAAAAGA CAAAAGTCTT GGATATAATA 
GTTCAAGTAG GAAGGACTGG AGCCCTTACT CCTACAGCTA TATTAGAGCC TGTAGCTATT 
TCAGGTTCAG TTGTAAGCCG AGCTACACTT CACAATGAGG ACTACATAAA AGAGAAAGAC 
ATAAGGATAG GAGACACGGT AATAGTTCAA AAAGCGGGAG AAATCATTCC TGAAGTAGTA 
GAAGTGGTAA AAGAAGAGAG GACTGGACAA GAAAGAGAAT TTGTAATGCC AGATAGATGC 
CCTGAATGCG GTGCTTTAGC TGTCAGGCTT CTGGGTGAGG CTATAAGGCG TTGCACAGGT 
CTAAATTGTC CTGCACAGCT TCTAAGAGGC ATTATCCACT TTGCTTCAAA AGATGCAATG 
GATATAGAAG GATTGGGGCC AGCTATAATA AATCAGCTTT TGTCAAAAGG TCTAATTCAC 
AACATAGCAG ATTTGTATTA TCTTAAATAC GAAGATTTAA TACAATTAGA AAGAATGGGG 
GACAAATCTG TTAAAAATTT ATTAAATGCT ATTGAAGAAA GCAAAACAAG AGATTTAGAT 
AGATTGCTCT TTGGCTTGGG TATAAACTTA ATAGGCAGTA AAGCTGCCCA AGTGATTGCT 
GAGCATTTTA AGACAATGGA CAATATCATG AAGGCAAAAT TTGAAGACTT TACACAGTTG 
CCTGACATAG GACCTAAGAT GGCAAGAAGC ATAGTTTCCT TTTTTGCAGA AAAACAAAAT 
GTAGAGATAA TTGAAAAACT TAAAAATGCT GGAGTAAACA TGAAAAAACT TTCAAAAGGA 
AAAGTAAGCA ACATATTTGA AGGGAAAACT TTTGTTTTGA CAGGAGCGTT GGAAAGTTAC 
ACGAGAGAAG AAGCTACCAG AATGATTGAA GAAAGAGGTG GAAAAGTTAC AAATTCAGTA 
AGTAAAAAAA CAGACTATGT ATTAGTAGGT AAAGATCCTG GTTCTAAACT TAAAAAAGCC 
CAAGAATTAG GAATAAAGAT AATTGATGAA AAACAATTTG AAGAAATGCT AAAAGGTGAA 
AATATTTAA 

 

Protein sequence

MDPKERIKEL REKINYHNYR YYVLDQPEIS DYEYDMLMRE LIELEEKYPE LKTPDSPSQR 
VGGEPLKEFE PFTHVVPMLS LANAFSEGEL RDFDRRVREA VGDVEYVVEL KIDGLSVELI 
YEKGIFTVGS TRGDGIVGEN VTQNLKTIKS IPLRLKDDVS LVVRGEVFMP RASFEKLNEE 
REKLGESLFA NPRNAAAGSL RQLDPKVTAK RDLDIFIFNL QKIEGRKFKT HIETLEFLNE 
QGFKIIPIHK KCSNIDEVIK EIEEIRNLRD KLPYDIDGAV VKVNDLEKRE ILGQTAKDPR 
WAIAFKYPAE RKKTKVLDII VQVGRTGALT PTAILEPVAI SGSVVSRATL HNEDYIKEKD 
IRIGDTVIVQ KAGEIIPEVV EVVKEERTGQ EREFVMPDRC PECGALAVRL LGEAIRRCTG 
LNCPAQLLRG IIHFASKDAM DIEGLGPAII NQLLSKGLIH NIADLYYLKY EDLIQLERMG 
DKSVKNLLNA IEESKTRDLD RLLFGLGINL IGSKAAQVIA EHFKTMDNIM KAKFEDFTQL 
PDIGPKMARS IVSFFAEKQN VEIIEKLKNA GVNMKKLSKG KVSNIFEGKT FVLTGALESY 
TREEATRMIE ERGGKVTNSV SKKTDYVLVG KDPGSKLKKA QELGIKIIDE KQFEEMLKGE 
NI