| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0261 |
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| Symbol | |
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| ID | 5876486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 275380 |
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| End bp | 278085 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641540602 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_001661914 |
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| Protein GI | 167038929 |
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| COG category | [K] Transcription |
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| COG ID | [COG3933] Transcriptional antiterminator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAGGA TTGATAAAGT TTATAATTGT GTAAAAGAAT TATGTAGCAA GCAATTTGCT
GAAAGAGGAG AAATAATTGG AGTTTCAGCT ATGGAAATTG CACATGCTCT TAATATACAA
AGAACAAATG CTTCCAGCGA TTTAAATACC CTTTTTAGAG AAGGAAAAGT TATAAAAGTT
GAAGGCAAAC CAGTTTTGTA TAAGGTTAAA GAACTTGATA TAGTTTCTGA TGAAAGTGAT
ATGGTAGTGA AAGATGTATT TGACAGCATA ATAGGAGCTA ATTTAAGCCT TAAAAATGCC
GTACAACAAG CAAAAGCTGC TATAATTTAT CCTCCCAATG GTCTTCATAC ACTTTTGCTT
GGAGAGACGG GTACAGGCAA ATCCATGTTT GCAGAGGTCA TGTATAGTTT CGCAAAAGAA
ATTGGAAGGA TAAAAAGGAA CGCTCCTTTT GTGACTTTTA ACTGTGCTGA CTATGCTAAT
AATCCGCAAC TTTTAATGTC ACAACTGTTT GGCGTGAAAA AAGGAGCGTA TACTGGTGCC
GATAAGGATA GAATGGGCCT TGTTGAAAAA GCAGATGGTG GCATACTTTT CCTTGATGAA
GTCCATAGGC TTCCACCAGA AGGACAAGAG ATGCTTTTTT ATCTAATTGA TAAAGGACTT
TATAGACGGC TTGGAGAATC TGAGACGCAA CATAAAGCGA ATGTTTTAAT AATATGCGCT
ACAACAGAAA ATATTGAGTC TACTCTTCTT AGGACTTTTA TAAGGCGGAT ACCAATGGTG
ATTAAATTGC CAGCTTTAGC AGAAAGAACA TATGAAGAAA GATTTGAACT TATTAAAAAT
TTCTTTAGAG AAGAAGCAGC TATTATTAAC ACTGATATTA TGATCACTTC AAATGCTTTG
AAAGCTTTAT TGCTTTATGA GTGTCCTAAT AATATAGGTC AACTGAAAAG TGATATAAAA
CTTTCAATTG CAAAAGCTTA TCTTGGGTAC ATGATGAAAA GAGATAAAGG AGTATGCGTG
CATACTGAAG ATTTACCTGA GTATGTCAGA AGAGGATTGT TTAAGTATAA GGAATCGAAA
GATGAAATTG ATAGATTTAT TACGGGAGAT ATAATAAAGT TTTCAGTTGA TAATGCTACT
CCTGTTATCC AACAGAATAA TCAGATATTC AATTTTTATG AGGCATTAGA AGAAAAAAGA
AAAGCTTTGG AGCAAAAAGG ACTTAACGAA AGTGATATAA GACTCATCAT GAGTATTGAT
ATAGAGACAT ATTTGAAAAA GTATCTCTTA AATCTTGATA AAAATAATTT GGAGGAATTG
TATAAAGTAG TGGATAAAAA GATTGTCGAT ATAGTAAACG ATTTTTTGAA TTATGCCAGT
AAAAAGTTAA AAAGGTCCTT TAGTGAAAAA ACTTTATACG GCCTTTCTAT GCATGTAGCC
AGTTCTGTTG AAAGAATACT AAGTGGCAAA GATATTGTAA ATCATCAGCT GGAAAACATA
AAGAGAGTGT ATGAAAAAGA ATTTGAAGTG GCAAAGGCTT TGAGAGAAAG GGTCCAAAAA
GAGTTTAACA TAAAAGTACC TGATGATGAA GTGGGTTTTG TTACAATGTT TTTATGTCTT
GAGGAGGAAA CAAAAGAAAA AGACGAAAGG GTAGGAATTA TTGTTGCAAT GCATGGAGAA
GCCGCTGCTA CTTCCATTGC AGAGGTTTCT AACAGGCTTT TAGGTGATAA TTATGTAATT
GGTTATAATA TGCCACTTGA TCAAAAACCA GAAGTTGCGT TAAATAATTT AACTAATATT
GTAAAAAGAG TGGACAAAGG AAGAGGCGTT TTACTTCTTG TCGACATGGG GTCATTAGTG
TTATTTGGTG ACATGATATA CGAAAAGACA GGAATACCCG TCAAAACGAT TGAAATGGTT
TCTACTCCTA TGGTTTTAGA AGCGGCAAGA AAGGCAATCC TTAACGCATC TTTAGAGGAA
GTGTATGATG CAGTTGTTAA TTTTAGTCCT TATGTAGGCA GAATCTACAA AGACAGTGTT
AAATTTGAAG CTTCTCTTAA AAAGAATGTT ATCATAACTG CTTGTATAAC CGGTGAAGGG
ACAGCAGTTA AACTTAAATC AATACTTGAA AGAGACCTTA ACTTAAAAGA GAAAGATATA
GATATTATTC CTATTGAGGT TGAAAGCAAA AGAGAATTTA GAAGAAAACT ACTCAACATC
AAAGAAGAAA AAAATATTTT AGCTGTTGTA AGTGCTATAA ATCCACAGGA TGATTCTATA
TTGTATATTT CTACATCAGA TGTGTTTGAT AATGATAAAT TATCTGTATT GAAAAATAAA
ATTGAAGCTC TTTCGCAAAT TGAGGTAATT GATAACATGA AGGAGGTTAT AAGAGAAAAT
ATAAAGATAG ATTCAGAAAA GTATATATCT TCTTTTAAAA GATTTTATGC AGCTTTAATA
AGAGAAGGAG TAAATTTAAA TGAAGATATT ACAATAGGAT TAATACTTCA TCTTGCCTGT
GTAGTTGAGC GTATATTACA AGGAAAACAG TTAATACACA TGAAGGATAC ACAAGAATAC
ATTAAGAATT ATCCAAAAGA GTTTGATATT ATAAAAAAAG CTATAAGGAT TATCGAAGAA
GGATGTAGTG TAAAAATTTC AGACGAAGAA TGTGTAAATA TGATGAAAAT AATCTATTCA
CTTTGA
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| Protein sequence | MKRIDKVYNC VKELCSKQFA ERGEIIGVSA MEIAHALNIQ RTNASSDLNT LFREGKVIKV
EGKPVLYKVK ELDIVSDESD MVVKDVFDSI IGANLSLKNA VQQAKAAIIY PPNGLHTLLL
GETGTGKSMF AEVMYSFAKE IGRIKRNAPF VTFNCADYAN NPQLLMSQLF GVKKGAYTGA
DKDRMGLVEK ADGGILFLDE VHRLPPEGQE MLFYLIDKGL YRRLGESETQ HKANVLIICA
TTENIESTLL RTFIRRIPMV IKLPALAERT YEERFELIKN FFREEAAIIN TDIMITSNAL
KALLLYECPN NIGQLKSDIK LSIAKAYLGY MMKRDKGVCV HTEDLPEYVR RGLFKYKESK
DEIDRFITGD IIKFSVDNAT PVIQQNNQIF NFYEALEEKR KALEQKGLNE SDIRLIMSID
IETYLKKYLL NLDKNNLEEL YKVVDKKIVD IVNDFLNYAS KKLKRSFSEK TLYGLSMHVA
SSVERILSGK DIVNHQLENI KRVYEKEFEV AKALRERVQK EFNIKVPDDE VGFVTMFLCL
EEETKEKDER VGIIVAMHGE AAATSIAEVS NRLLGDNYVI GYNMPLDQKP EVALNNLTNI
VKRVDKGRGV LLLVDMGSLV LFGDMIYEKT GIPVKTIEMV STPMVLEAAR KAILNASLEE
VYDAVVNFSP YVGRIYKDSV KFEASLKKNV IITACITGEG TAVKLKSILE RDLNLKEKDI
DIIPIEVESK REFRRKLLNI KEEKNILAVV SAINPQDDSI LYISTSDVFD NDKLSVLKNK
IEALSQIEVI DNMKEVIREN IKIDSEKYIS SFKRFYAALI REGVNLNEDI TIGLILHLAC
VVERILQGKQ LIHMKDTQEY IKNYPKEFDI IKKAIRIIEE GCSVKISDEE CVNMMKIIYS
L
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