| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0254 |
|---|
| Symbol | |
|---|
| ID | 5876362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 268184 |
|---|
| End bp | 268939 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641540595 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001661907 |
|---|
| Protein GI | 167038922 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000359378 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAT TGTCTTTGAC ATTGGCGTCA AGTCTTGTGC TAATATCAAT TTTTGTTTCT
TATTACCAAA AACTGGGGAT TGAAAAGGAA ATAGTTATAG GTACTATAAG AGCGGTTGTG
CAGCTTACAA TAGTGGGATA CATTTTACAC TACATATTTG CTGCCGATAA TGCTTTATTT
ACCTTGGCAA TGGTAAGCTT AATGATAGTA GTTGCTGGAA ATAATGCTTC AAAGAGAGGG
AAGGGAATAC CGAATGTTTT TTATTTTATC ACTTTTTCAA TTGCCTTAAG TGCCGCGATT
ACAATTTCTC TGCTTATTTT GTTTGGGAAT ATACATTTTA GACCCCAGGA AGTTATACCT
GTATCAGGAA TGATAATAGG AAATTCAATG GTGGCTTCAG GACTTGCTGT TTCAAGGCTA
AAAGACGAAA TAAAAAATAA GTCAGAGGAA ATAGAGGCGT ATTTGTCACT TGGTGCAACT
TCAAGGCAAG CCGCACAAAA AGTGATAAAG ACTGCAATAA AGACAGGTAT GATTCCTACA
GTTGACAGTA TGAAAACTCT TGGTATCGTC CAACTTCCAG GGATGATGAC AGGTCTCATA
TTGGGAGGAG TGGACCCTAT TGAGGCAGTT AAATATCAGA TAATGGTTAC ATTTATGTTA
GCCTCTACAG TAGCGATTTC CTGTTTTAGT GTTACCTTTC TTACATACAG AAACTTTTTT
ACAAAGTACC ATCAACTTGT GTCTGATTTA CAATAA
|
|---|
| Protein sequence | MSVLSLTLAS SLVLISIFVS YYQKLGIEKE IVIGTIRAVV QLTIVGYILH YIFAADNALF
TLAMVSLMIV VAGNNASKRG KGIPNVFYFI TFSIALSAAI TISLLILFGN IHFRPQEVIP
VSGMIIGNSM VASGLAVSRL KDEIKNKSEE IEAYLSLGAT SRQAAQKVIK TAIKTGMIPT
VDSMKTLGIV QLPGMMTGLI LGGVDPIEAV KYQIMVTFML ASTVAISCFS VTFLTYRNFF
TKYHQLVSDL Q
|
|---|
| |