Gene Teth514_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_0193 
Symbol 
ID5875664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand- 
Start bp194810 
End bp195241 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content34% 
IMG OID641540536 
Productnickel responsive regulator 
Protein accessionYP_001661848 
Protein GI167038863 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0129549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTGA TAAGTCTGGA AGAAATAACA CGTTTTGGAG TTTCAATGGA ATCAAAACTT 
CTTTATCAAT TTGACGAGCT TATAAAGAAA AAAAATTACA ACAACAGGTC TGAAGCTATA 
CGAGATTTGA TAAGAGATTT TATCGTGGAA AATCAGTGGG AAGCAGAGGA TGTAGAAACT 
ATTGGAACAA TTACTTATGT TTTTAATCAT GAAGTGAGGG AAATAAGTGA CAAACTGACA 
GATATGCAAC ACAAGCACTA TCAAAACATA ATCTCAACAA TGCACGTACA CTTGGATAAG 
CACAACTGCC TCGAAGTAAT GGTAGTAAAA GGCACTTCAA AAGAAATTAC AAAAATTGCA 
GATGAAATTA TAAGCACAAA AGGAGTAAAG CATGGAAAAC TGGTAATGAC AACAACAGGT 
GAAAATTTGT AA
 
Protein sequence
MGVISLEEIT RFGVSMESKL LYQFDELIKK KNYNNRSEAI RDLIRDFIVE NQWEAEDVET 
IGTITYVFNH EVREISDKLT DMQHKHYQNI ISTMHVHLDK HNCLEVMVVK GTSKEITKIA 
DEIISTKGVK HGKLVMTTTG ENL