| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0156 |
|---|
| Symbol | |
|---|
| ID | 5876074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 155103 |
|---|
| End bp | 156515 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641540499 |
|---|
| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
|---|
| Protein accession | YP_001661811 |
|---|
| Protein GI | 167038826 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3344] Retron-type reverse transcriptase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCGA AAGATATGCA GAGACTGCAG ACAACTCAAC AAAGAGGCTA TCCGTTGAAT
AGAGAAATGG AATTTCAAAA GACAACGGAA GTGCATAGTA TATCATCGGC GTCAAAAGAT
AGAAGAAACG ATGTACAAAG ATATACCAGC AAGATGCTTG AAATGATAGT AGAACGAGGA
AACATGAGAG CAGCATACAA GCGCGTTGTT GCAAATAAAG GAAGCCATGG AGTCGATGGG
ATGGAAGTAG ATGAACTTCT ACCGTATCTC AAAGAAAACT GGGCAACCAT AAAACAACAA
CTGCTGGAGG GGAAATACAA ACCACAACCA GTGCGAAGAG TAGAAATTCC CAAACCAGAT
GGAGGAGTAA GACTACTAGG AATACCTACA GCACTAGATA GGCTAATACA ACAAGCAATA
GCCCAAATAC TAAATAGAGT CTACAACCAT ACATTTTCTG ATAGCAGTTA TGGATTTAGA
CCAGGACGCA GTGCAAAAGA CGCAATAAAA GCCGCAGAAG CATACATAAA TGAAGGGTAC
ACATGGGTTG TAGATATGGA CTTAGAAAAG TTCTTTGACA GAGTAAACCA CGACATAATA
ATGTCCAAAC TAGAAAAGCG GATAGGAGAC AAAAGGGTAC TAAAGTTAAT ACGAAGATAC
CTAGAATCAG GAGTAATGAT AAACGGAATC AAAGTATCAA CAGAAGAAGG AACACCCCAA
GGAGGGCCAT TAAGTCCCCT ATTAGCAAAC ATAATGTTGG ACGAACTAGA CAAAGAACTT
GAAAAGAGAG GACACAAATT CTGTCGATAC GCAGATGACT GCAACATATA TGTAAAAAGC
AGGTCTGCAG GAAACAGAGT AATGAAGAGC ATAAAGAAAT TCATAGAAAG CAAATTAAAA
CTAAAAGTCA ACGAAGCAAA AAGTGCTGTA GATAGACCAT GGAGAAGAAA ATTTCTTGGA
TTTTCATTCT ACACAAAAGA AAACGAAGTA AGAATAAGAA TCCATGAAAA ATCCATCAAA
AGGTTTAAGG AAAAAGTAAG AGAAATAACC AATCGGAACA AGGGAATAAG CATGGGAAAC
AGAATAAAAA GACTAAATCA AATAACAACA GGATGGGTCA ACTATTTTGG ATTAGCAGAC
GCAAAAAGCA TAATGAAAAC CCTTGACGAA TGGATAAGGC GAAGACTAAG GGCATGTATA
TGGAAACAAT GGAAGAAGAT AAAAACGAGG CATGATAATT TAGTAAAACT AGGAGTAGAA
GAACAAAAAG CCTGGGAATA CGCCAATACA AGGAAAGGCT ACTGGAGAAT ATCCAATAGC
CCAATCCTAA ATAAGACTCT TACAAATAAA TACTTTGAAA GCATAGGTTA TAAGAGTTTA
TCCCAAAGAT ATCTAATTGT ACACAATTCC TAA
|
|---|
| Protein sequence | MDSKDMQRLQ TTQQRGYPLN REMEFQKTTE VHSISSASKD RRNDVQRYTS KMLEMIVERG
NMRAAYKRVV ANKGSHGVDG MEVDELLPYL KENWATIKQQ LLEGKYKPQP VRRVEIPKPD
GGVRLLGIPT ALDRLIQQAI AQILNRVYNH TFSDSSYGFR PGRSAKDAIK AAEAYINEGY
TWVVDMDLEK FFDRVNHDII MSKLEKRIGD KRVLKLIRRY LESGVMINGI KVSTEEGTPQ
GGPLSPLLAN IMLDELDKEL EKRGHKFCRY ADDCNIYVKS RSAGNRVMKS IKKFIESKLK
LKVNEAKSAV DRPWRRKFLG FSFYTKENEV RIRIHEKSIK RFKEKVREIT NRNKGISMGN
RIKRLNQITT GWVNYFGLAD AKSIMKTLDE WIRRRLRACI WKQWKKIKTR HDNLVKLGVE
EQKAWEYANT RKGYWRISNS PILNKTLTNK YFESIGYKSL SQRYLIVHNS
|
|---|
| |