| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0155 |
|---|
| Symbol | |
|---|
| ID | 5876073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 153538 |
|---|
| End bp | 154644 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641540498 |
|---|
| Product | D-xylose ABC transporter, periplasmic substrate-binding protein |
|---|
| Protein accession | YP_001661810 |
|---|
| Protein GI | 167038825 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATGGA AAATTTCCAG AAAAATTGTT TTACCACTTA TAATGGTGTT AATTTTGACA
TTTGTATTTT CTGGATGTGC TACTACATCT AACAACCAGC AAAGTACTAC TTCTACAACA
ACTTCTTCAG ATAATGCTAA AAATACAGAA ACAATCAAAA TAGGCTTCAG TATGGATAAT
TTGGCTTTGG AAAGATGGCA AAAGGATAGA GATTTATTTG TAAAAAGAGC GAAAGAATTG
GGAGCAGAAG TTTTAGTGCA ATCTGCTAAC AGTGATCCAC AATTGCAATA TTCACAATGC
CAAAATTTAA TTGCTCAAGG GATAAAAGTT TTAGTTATAC TTCCGACTGA TGGTAGTGCT
ATTGCGCCTA TAGTAGAAGA AGCGCATAAA GCAGGTGTAA AGGTTTTAGC CTATGATAGA
TTAATAATGA ACTCTGATTT AGATTATTAT GTATCTTTTG ATAATGTTAA AGTTGGAGAA
TTACAAGCAG AAGCAATTAC TAAATTAGTA CCCAAGGGTA GGTATTTCTT GCTTGAAGGT
TCTCCGACAG ATAATAATGC AAAACTATTT TATGAAGGGC AGATGAAAGT ATTAAAGCCA
CTAGTTGACA AGGGGGATAT TAAAATTGTA GGAGAACAAT GGGCTAAAAA TTGGGATACC
AACGAAGCCT ATAAGATTAT GCAAAATGCG TTAACAGCTA ATAATAATAA AATTGATGCA
GTTGTTGCCG CTAATGACAG TACTGCATTG GGAGCAATCA GAGCTTTAGA AGAACAGAAA
TTAGCTGGAA AAGTGCCTAT TTCTGGTCAA GATGCTGACT TAGCAAATTG TCAGTTGATT
GTGGAAGGCA AACAAACCAT GACTGTATAT AAGCCAATCG TATTAGAAGC TACAAAAGCG
GCTGAAATGG CAGTTGCTAT GGCGAAAGGA GAAAAAATTG AAACAAATGG AACTGTAAAT
AATGGAAAGA TAGATGTACC TTCTGTTTTG GTAACTCCTA TTGCAGTTGA CAAAAATAAT
ATGTTTGATA CGGTTATAAA GGATGGGTTC CAAAAGTTAG AAGAAGTTTA TAAGAATATT
CCCAAAGACC AATGGCCTAA ACAATAA
|
|---|
| Protein sequence | MSWKISRKIV LPLIMVLILT FVFSGCATTS NNQQSTTSTT TSSDNAKNTE TIKIGFSMDN
LALERWQKDR DLFVKRAKEL GAEVLVQSAN SDPQLQYSQC QNLIAQGIKV LVILPTDGSA
IAPIVEEAHK AGVKVLAYDR LIMNSDLDYY VSFDNVKVGE LQAEAITKLV PKGRYFLLEG
SPTDNNAKLF YEGQMKVLKP LVDKGDIKIV GEQWAKNWDT NEAYKIMQNA LTANNNKIDA
VVAANDSTAL GAIRALEEQK LAGKVPISGQ DADLANCQLI VEGKQTMTVY KPIVLEATKA
AEMAVAMAKG EKIETNGTVN NGKIDVPSVL VTPIAVDKNN MFDTVIKDGF QKLEEVYKNI
PKDQWPKQ
|
|---|
| |