Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_0074 |
Symbol | |
ID | 5876034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | - |
Start bp | 75887 |
End bp | 76543 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 641540420 |
Product | putative RNA polymerase sigma factor SigI |
Protein accession | YP_001661732 |
Protein GI | 167038747 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02895] RNA polymerase sigma-I factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGATATAA ACGACAGAGT ATACGCAGCC AAAAAAGATC CCTCCGAAAG AGAAAAATTA ATTCAAGAAT ATACCCCCTT TGTCATAAAA CAATTGTCTT TATTTACAAA TAGATATATA GATGAAAGAA ATAGCAACGA ATTAAGCATA GGCCTTATAG CTTTTAACGA AGCTATAGAC AGTTTTGATA ACACAAAAGG TCCCTTCTTA AGCTTTTCAA GTTTGCTCAT TAAAAGGCGA CTTATAGATT TTTTACGGCA AAATCAGCAA AATACTATTC CTTTAGAACT ATATGTAGAA AAAGGCACTG ATTATGAGGC AGAAAATAGA AAATTAGAAA TGATTTCTTT TGTAAACTTG CTAAGTCTTT ACAATATAAC TTTAGATGAT TTAGTTAAGC AATCCCCCAA ACACTCAGAC ACCAGAAAAA TAGCTACAAA AATTGCTTAT ACAATTTGTA AAAACGAGAA ATTACTAGAA TATTTAAAAA ACAGAAAGAA TCTTCCTATA AAAGATTTAA TAAGTATTTT AAAAGTAAGC CGCAAGACTA TAGAAAAACA TAGAAAATAC ATAATAGCGT TAGTAATAAT TATTTCTGAA GACTTACCTC TTCTAAAACA ATACATAAGC CCAGAAAGTG AGGTGGCAAA AATATGA
|
Protein sequence | MDINDRVYAA KKDPSEREKL IQEYTPFVIK QLSLFTNRYI DERNSNELSI GLIAFNEAID SFDNTKGPFL SFSSLLIKRR LIDFLRQNQQ NTIPLELYVE KGTDYEAENR KLEMISFVNL LSLYNITLDD LVKQSPKHSD TRKIATKIAY TICKNEKLLE YLKNRKNLPI KDLISILKVS RKTIEKHRKY IIALVIIISE DLPLLKQYIS PESEVAKI
|
| |