Gene BcerKBAB4_5164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5164 
Symbol 
ID5845405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp5140304 
End bp5141131 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content38% 
IMG OID641380289 
Productspermidine synthase 
Protein accessionYP_001647937 
Protein GI163943053 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID[TIGR00417] spermidine synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTAT GGTTCACTGA AAAACAAACA AAGCATTTTG GAATTACGGC GCGTATTAAC 
CGCACATTAC ATACGGAGCA AACAGAATTT CAAAAACTTG ATATGGTTGA AACGGAAGAG
TTCGGAAACA TGCTTATTTT AGATGGCATG GTTATGACAA CAGAAAAGGA CGAGTTCGTT
TATCATGAAA TGGTAGCGCA CGTACCTTTA TTTACACATC CAAACCCTGA AAACGTATTA
GTAGTAGGTG GTGGCGATGG TGGTGTTATT CGTGAAGTAT TAAAACACCC AAGCGTAAAG
AAAGCAACTC TTGTTGAAAT TGATGGAAAA GTAATTGAGT ACTCTAAACA ATACTTACCA
TCAATTGCAG GCGCATTAGA TGATGAGCGT GTAGAAGTAA AAGTAGGAGA CGGTTTCCTA
CACATCGCAG AAAGCGAAAA TGAATATGAC GTAATTATGG TAGATTCTAC TGAGCCAGTA
GGCCCAGCAG TAAACCTATT TACAAAAGGC TTCTACGCTG GAATTTCTAA AGCGTTAAAA
GAAGATGGTA TTTTCGTTGC TCAAACGGAC AACCCTTGGT TTACACCAGA ACTAATTACA
ACTGTGTTTA AAGACGTAAA AGAGATTTTC CCAATTACTC GTCTATACAC AGCAAACATT
CCGACGTATC CAAGTGGACT TTGGACGTTC ACAATCGGAT CTAAAAAACA TGATCCATTA
GAAGTAAGTG AAGAGCGTTT CCATGAAATC GAAACGAAAT ATTACACAAA AGAATTACAC
AATGCAGCAT TCGCATTACC GAAATTTGTT GGCGATTTAA TTAAGTAA
 
Protein sequence
MELWFTEKQT KHFGITARIN RTLHTEQTEF QKLDMVETEE FGNMLILDGM VMTTEKDEFV 
YHEMVAHVPL FTHPNPENVL VVGGGDGGVI REVLKHPSVK KATLVEIDGK VIEYSKQYLP
SIAGALDDER VEVKVGDGFL HIAESENEYD VIMVDSTEPV GPAVNLFTKG FYAGISKALK
EDGIFVAQTD NPWFTPELIT TVFKDVKEIF PITRLYTANI PTYPSGLWTF TIGSKKHDPL
EVSEERFHEI ETKYYTKELH NAAFALPKFV GDLIK