| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_5018 |
|---|
| Symbol | |
|---|
| ID | 5845259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 4981183 |
|---|
| End bp | 4982943 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641380144 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_001647792 |
|---|
| Protein GI | 163942908 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGT CTGTTTCAGC TGAGCAAATT GAATTGAAAT CGAGTTTACC AGGAAGTAAG
AAAGTGTATG TGGATGGAAC ACGTGAAGGT ATGAAAGTAC CAATGCGCGA GATTGAACAA
AGCGATACGA ACGGTGTTCA AAATCCGCCA ATCCGTGTGT ATGATACGAG TGGACCTTAT
ACAGATCCAG AGTATAAAGT GGAGCTGGAA AAAGGGTTGC AGGCGCCGCG CCACTCTTGG
ACCTTGGGGC GTGGTGATGT GGAAGCTTAT GAAGGACGCG AAATTAAACC TGAGGATGAC
GGTGTGAAAG TGGCTTCAAA ACATACACCT GTTTTCCCGC AAATGGATCG TAAGCCGCTT
AGAGCGAAGC AAGGTGCAAA TGTTTCGCAA ATGCATTATG CGCGTAATGG CATTATTACG
TCTGAGATGG AATATGTTGC GATTCGTGAA GGGGTAGAGC CTGAATTTGT TCGTAAGGAG
ATTGCAGAAG GTCGTGCGAT TTTGCCGGCG AACATTAACC ATCCTGAAGC GGAACCGATG
ATAATTGGAC GTAATTTTCA CGTGAAGGTA AATGCAAATA TCGGAAACTC TGCTGTATCG
TCTTCTATTG CAGAAGAAGT AGAGAAGATG ACGTGGGCGA CTCGCTGGGG TGCAGATACG
ATTATGGATT TATCTACAGG TAAAAACATT CATACAACAC GTGAGTGGAT TATTCGTAAT
GCTCCGGTAC CAGTTGGAAC TGTGCCAATT TATCAAGCGC TTGAAAAAGT AAACGGAATT
GCAGAGGATT TAACGTGGGA AGTGTATCGT GATACGTTAA TTGAGCAGGC GGAGCAAGGC
GTTGATTACT TCACGATTCA CGCTGGTGTA TTACTTCGTT ACATTCCAAT TACTGCAAAG
CGTATGACAG GTATTGTTTC GCGCGGTGGT TCGATTATGG CGCAGTGGTG TTTATTCCAT
CATAAAGAAA ACTTCCTATA TACTCACTTT GAAGAGATTT GTGAAATTAT GAAGCAGTAC
GATGTTTCGT TTTCTCTTGG AGATGGATTA CGTCCAGGTT CTATTGCAGA TGCAAATGAC
GAAGCGCAGT TTTCTGAGCT TGAGACACTT GGTGAATTAA CAAAAATCGC TTGGAAACAT
GATGTGCAAG TTATGATTGA AGGACCTGGG CATGTACCGA TGCATTTAAT TAAAGAAAAT
ATGGAGAAAG AACTTGATAT TTGTCAGGGT GCGCCGTTCT ATACACTTGG GCCGTTAACG
ACAGATATTG CACCAGGTTA TGATCATATT ACTTCAGCGA TTGGTGCTGC GATGATCGGC
TGGTTTGGAA CGGCGATGCT TTGTTATGTA ACCCCGAAAG AACATTTAGG TTTACCGAAC
AAAGATGATG TTCGCGAAGG GGTTATTACG TACAAAATCG CTGCGCATGC AGCCGATCTT
GCGAAAGGGC ATAAAACGGC TCATCAGCGT GATGATGCAC TTTCAAAAGC ACGATTTGAA
TTCCGTTGGC GCGACCAATT TAATTTATCT TTAGATCCTG AACGCGCGAT GGAGTACCAT
GATGAAACGT TGCCAGCAGA AGGGGCGAAA ACAGCGCATT TCTGTTCAAT GTGTGGCCCA
AAGTTTTGTA GTATGAGAAT TTCACATGAT ATTCGTGAAT ATGCGAAAGA AAATGACTTA
GAAACGACAG AAGCAATTGA AAAAGGAATG AAAGAGAAAG CGGTAGAATT CAAAGAAACT
GGTAGTCACT TATATCAATA A
|
|---|
| Protein sequence | MKQSVSAEQI ELKSSLPGSK KVYVDGTREG MKVPMREIEQ SDTNGVQNPP IRVYDTSGPY
TDPEYKVELE KGLQAPRHSW TLGRGDVEAY EGREIKPEDD GVKVASKHTP VFPQMDRKPL
RAKQGANVSQ MHYARNGIIT SEMEYVAIRE GVEPEFVRKE IAEGRAILPA NINHPEAEPM
IIGRNFHVKV NANIGNSAVS SSIAEEVEKM TWATRWGADT IMDLSTGKNI HTTREWIIRN
APVPVGTVPI YQALEKVNGI AEDLTWEVYR DTLIEQAEQG VDYFTIHAGV LLRYIPITAK
RMTGIVSRGG SIMAQWCLFH HKENFLYTHF EEICEIMKQY DVSFSLGDGL RPGSIADAND
EAQFSELETL GELTKIAWKH DVQVMIEGPG HVPMHLIKEN MEKELDICQG APFYTLGPLT
TDIAPGYDHI TSAIGAAMIG WFGTAMLCYV TPKEHLGLPN KDDVREGVIT YKIAAHAADL
AKGHKTAHQR DDALSKARFE FRWRDQFNLS LDPERAMEYH DETLPAEGAK TAHFCSMCGP
KFCSMRISHD IREYAKENDL ETTEAIEKGM KEKAVEFKET GSHLYQ
|
|---|
| |