Gene BcerKBAB4_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_4242 
Symbol 
ID5844455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp4237001 
End bp4237660 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content37% 
IMG OID641379352 
ProductTPR repeat-containing protein 
Protein accessionYP_001647029 
Protein GI163942145 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACA AACTTGAAAC AGGTATTAAA TATATGCAAG AAGGAAACTG GGAAGAAGCA 
GCTAAAAATT TCACAGAAGC AATCGAAGAA AATCCGAAAG ATGCGCTTGG ATACATTAAC
TTTGCGAATT TATTAGATGT ATTAGGTGAT AGTGAGCGAG CAATTGTATT TTATAAACGT
GCATTAGAAT TAGATGGTAA ATCTGCTGCT GCTTATTATG GCTTAGGAAA TGTATATTAC
GGTCAAGAGC AATTTGCAGA GGCGAAGGCT GTATTTGAAC AAGCGATGCA AGTGGGATTA
CAATCAGCTG ACGTAACATT TATGTTAGGT ATCACACATG TGCAACTTGG AAATGATCGT
CTTGCACTTC CATTTTTACA AAGAGCGACG GAATTAGATG AAGGCGATGT AGAAGCTGTT
TTCCAATGCG GACTTTGCTT CGCACGACTA GAACATATTC AAGAGGCAAA ACCTTATTTT
GAAAAGGTGT TAGAAATGGA TGAAGAGCAT GCAGATGCGT ATTATAATTT AGGTGTTGCG
TACGTATTCG AGGAGAATAA CGAGAAAGCT CTTACTTTAT TTAAGAAAGC GACTGAAATT
CAAGCAGACC ACTTTTTAGC TGGTAATGGT ATTCGTTTAT TAGAGCAAGA AGCTGAATAA
 
Protein sequence
MSNKLETGIK YMQEGNWEEA AKNFTEAIEE NPKDALGYIN FANLLDVLGD SERAIVFYKR 
ALELDGKSAA AYYGLGNVYY GQEQFAEAKA VFEQAMQVGL QSADVTFMLG ITHVQLGNDR
LALPFLQRAT ELDEGDVEAV FQCGLCFARL EHIQEAKPYF EKVLEMDEEH ADAYYNLGVA
YVFEENNEKA LTLFKKATEI QADHFLAGNG IRLLEQEAE