| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_4140 |
|---|
| Symbol | ispH |
|---|
| ID | 5844353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | + |
|---|
| Start bp | 4142847 |
|---|
| End bp | 4143797 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641379253 |
|---|
| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
|---|
| Protein accession | YP_001646930 |
|---|
| Protein GI | 163942046 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000642278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTG TTAAAATTTC CCCTCGTGGT TATTGCTACG GTGTTGTTGA CGCAATGGTT
ATTGCACGTA ACGCCGCATT AGATAAATCA TTACCGAGAC CCATTTATAT TTTAGGTATG
ATTGTTCACA ATAAGCATGT CACAGATGCT TTCGAAGAGG ATGGCATCAT TACATTAGAC
GGTCCAAGTC GATTAGAAAT TTTAGATAAA ATCGATTCTG GTACTGTTAT TTTCACTGCA
CACGGTGTTT CTCCAGAAGT TAAACAACGT GCAAAAGAAA AAGGTTTAAC GACAATTGAT
GCAACTTGTC CAGATGTTAC AAAAACACAT GACCTTATCG AAGCAAAGAA AGCTGAAGGA
TACCATGTCA TTTATATCGG CAAAAAAAAT CATCCAGAAC CAGAAGGCGC AGTTGGTATC
GCACCTGATA TCGTTCATCT TATCGAAAAA GCTGATGATT TAAAAACACT AGAAATTCCA
ACGGATAAAA TTTTAGTTAC GAATCAAACA ACAATGAGTC AATGGGATGT TCAACATTTA
ATGGAGGACA TTCAGAAAAA ATTCCCAACA GCAGAATTCC ACAAGGAAAT TTGTTTAGCA
ACTCAAGTTC GCCAAGAAGC TGTCGCTAAA CAAGCTGATG TTGCAGATTT AACAATTGTT
GTCGGTGATC CGAAAAGTAA CAACTCAAAC CGTTTAGCAC AAGTATCACA AGAAATCGCT
GGTACGACAG CATACCGCGT TGCAGACGTA AGTGAAATCC AATTAGAATG GCTACAAGGT
GTAGAAAACG TAGCTGTTAC AGCAGGTGCT TCTACTCCAA CGCCAATTAC AAAAGAAGTT
ATTGCTTTCT TAGATCAATA TGACCCAATG AATCCAGCTA CATGGGACAG AATTCGAAAA
GTACCACTTC AAAAGATACT ACCTCGTGTA AAAGTGAAAA AAGAACAATA A
|
|---|
| Protein sequence | MKIVKISPRG YCYGVVDAMV IARNAALDKS LPRPIYILGM IVHNKHVTDA FEEDGIITLD
GPSRLEILDK IDSGTVIFTA HGVSPEVKQR AKEKGLTTID ATCPDVTKTH DLIEAKKAEG
YHVIYIGKKN HPEPEGAVGI APDIVHLIEK ADDLKTLEIP TDKILVTNQT TMSQWDVQHL
MEDIQKKFPT AEFHKEICLA TQVRQEAVAK QADVADLTIV VGDPKSNNSN RLAQVSQEIA
GTTAYRVADV SEIQLEWLQG VENVAVTAGA STPTPITKEV IAFLDQYDPM NPATWDRIRK
VPLQKILPRV KVKKEQ
|
|---|
| |