Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_4096 |
Symbol | |
ID | 5844308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 4098468 |
End bp | 4099505 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641379208 |
Product | type II secretion system protein |
Protein accession | YP_001646886 |
Protein GI | 163942002 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.210618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATATGT TTAAGAGAAA ATGGAGTTTA AGTGATCAAG CATTATTATG TAAAAGATTA AGTGATTTAT TAGAGAAAGG TTACTCACTT TTGCAGGCGT TGGAATTTTT GCAGTTGCAA CTACCATTAG GGAAGAAATT ACAGTTACAG CGTATGATCG AGGGATTGAA AAATGGACAA AGTTTGCACG CTTCTTTTCA CCAATTAATG TTTCACTCTG AGATGTTAAG TTATTTGTTT TATGCAGAGC GACATGGTGA CATTTCTTTT GCTTTGCAAC AAGGGAGCGT ACTTCTTTAC AAGAAAGATA AATATAGGAA AGATATGATG AAAGTAATGC GATATCCTAT GTTTTTATCA TTTTTTTTAA TGATTATGCT TTCTGTTTTT AACCTCATTT TATTGCCTCA GTTTGAAATG ATGTATAGTT CTTTACGTTC TACAGCACCA CCACTTACGG AGCAAATTTT AGTTGCAATT AAATTATTAC CCTACTTCAT TTATATGATT GTTCTTATCG TTATAACGGG ATTTAGTATA TATATATTTT ATTTCCGAAA ACTTCCGCCT ACTCAAAAGG TAAAGATTAT GATCCGTATT CCCCTTATGA AAACATTTCT TATTTTAAAT CATTCGCATT ATTTTTCCAC TCAATTAAGT GGTTTATTAC ACGGTGGATT GTCGGTACAC GAAGCATTAA CAATAATGAT GAAGCAAAAT TATCATCCGT TCTTTCAGTA TGAAGCAGAC CGAATTGAGC GGCAATTAAT TGCAGGAGAA CCGTTACAAT CTATTATTGA TAAAAGCGGT TATTACGAGA AAGAACTTTC TTATATCATT ACGCATGGAC AAGCAAACGG TAATTTAGCA AATGAGCTTG GTGATTACAG TGAGCTCATT ATTGAAAAGG TAGAACAAAA AATTAAACGT ATGTTATTTG TGATTCAACC CATTTTATTT ACATGTCTTG GGGTTATAGT CATTTTGATG TACTTAGCGA TGATTATGCC GATGTTTCAA ATGATGAATT CTATATAG
|
Protein sequence | MYMFKRKWSL SDQALLCKRL SDLLEKGYSL LQALEFLQLQ LPLGKKLQLQ RMIEGLKNGQ SLHASFHQLM FHSEMLSYLF YAERHGDISF ALQQGSVLLY KKDKYRKDMM KVMRYPMFLS FFLMIMLSVF NLILLPQFEM MYSSLRSTAP PLTEQILVAI KLLPYFIYMI VLIVITGFSI YIFYFRKLPP TQKVKIMIRI PLMKTFLILN HSHYFSTQLS GLLHGGLSVH EALTIMMKQN YHPFFQYEAD RIERQLIAGE PLQSIIDKSG YYEKELSYII THGQANGNLA NELGDYSELI IEKVEQKIKR MLFVIQPILF TCLGVIVILM YLAMIMPMFQ MMNSI
|
| |