| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_4008 |
|---|
| Symbol | |
|---|
| ID | 5844220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 4035572 |
|---|
| End bp | 4037644 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641379123 |
|---|
| Product | PAS modulated sigma54 specific transcriptional regulator |
|---|
| Protein accession | YP_001646801 |
|---|
| Protein GI | 163941917 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA ATGTGTTAAT TGTTGGAGCA GGTGAAGGTG GGAGTACACT GCTGAGTCTG
TTGCAAAATT CGAATATATT TCAAATTATA GGAGTTATTG ATAGTAATCC AATTGCGAAA
GGATTACAAA TCGCAAAGGA ATATGGGACT CCGATTGGTG ATAGTGTAAC TCCGTTTCTT
TCTATGCATA TTGATGTAAT GTTTGATATG ACAGGTGATT ATGATTTACA TAAAGTTTTA
TTGGGAAGCA AGCATAAAGA CACCCTTCTT ATACCAGGGG ATATTGCAAA AATTGTTACG
AGACTAGCGC ATGAGAAGGA AAGCTTAATT GGAAAGCTAG AAGAACAGAC GCAACAAGGG
AATTTAATTT TAAATTCAAC GCATGACGGT ATGATTGTTA TAGACCAAGA GGGACAAGTT
CGTCTGTTTA ATAAAAGCGC AGAGCGTATT ACTGGATATA AAAAAGAGGA AGCAATAGGG
AAATATATTT TAGAAGTTAT TCCAACGAGT AAGTTGCTTC GTATTATACG CACGAAAAAA
ATAGAAGTGA ATCATGAACT GACGTTAGAG AATGAAAAAA AGATTATTAC AACGCGTATT
CCGATATTAA AAGAAGGTGG AGAGGTTCAA GGGGCATTTG CGATTTTTAA AGACATTACA
GAAGTTGTAG ATTTAGCGGA AGAAGTTACA GACTTAAAAG AAATTCAAAC GCTACTTGAG
GCGATTATTA ACTCATCTGA GGAAGCAATT TCGGTTGTTG ATGAGAAAGG AAGAGGACTA
GTTATAAACC CTGCTTATAC GAAGTTAACG GGTTTGACTG AAGAAGAAAT TATTGGGAAG
CCGGCTACAA CTGATATTGT GGAAGGTGAA AGTATGCATA TGAAAGTACT TCGGACGCGC
CGAGCGGTAC GAGGAATACA TATGAAGATT GGGCAAAAAA AGCGAGATGT AATTGTAAAC
GTAGCACCGG TTATTGTCGA TGGGATATTG AAAGGGAGCG TCGGGGTAAT TCGCGATGTA
TCAGAAATTC AAAAGTTAAC AAATGAATTG AATAGGGCAA GACAAATTAT TCGAACGTTA
GAAGCAAAAT ATTCATTTGA TGATATTGTT GGTGATTCAG ATGAAACGAC GGCAGCTATT
GAACAAGCAA AACTTGGAGC GAATACACCG GCAACAGTAT TGCTTAGAGG GGAATCTGGT
ACGGGGAAAG AGTTATTTGC ACACGCTATT CATAACAGTA GTAATCGAAA ATACAATAAG
TTTGTACGAG TAAACTGTGC TGCTATTTCT GAGACCTTAT TAGAAAGTGA ATTATTCGGT
TATGAGGAAG GCGCGTTTTC TGGAGCGAAA AGAGGCGGGA AACGAGGATT CTTTGAAGAA
GCGAATAATG GAAGTGTTTT TTTAGATGAA ATCGGAGAGT TATCTGCAAA TACGCAAGCG
AAGCTCCTTC GTGTGCTACA AGAAAAAGAA ATTGTGAAAG TAGGGGGAAC GAAAGCGATA
CCTATTAATG TCCGGGTAAT TGCAGCAACA CATGTGAATT TAGAAAAGGG CATTCTAGAA
GGAGAGTTCA GAGAGGACTT ATATTATCGT TTAAATAAAA TCCCGATTCA AATTCCTTCC
CTTCGTCAGC GTAAAGGAGA TATACCAGCG ATTGCAGAAA GGTTAATTCA AAAAATTAAT
CAAGATTATG GTCGTAATGT AGAAGGACTC ACCGATTCAG CCGTTTCGTA TTTACAATCA
TATGAATGGC CAGGGAATGT TAGGGAACTT GAAAATATTT TAGGGCGAGC TATTATCTTT
ATGAATTATA ACGAAATATA TATTGATGTA CATCATTTAC CGCCTTTACA TAAAGAAGAA
CAAGTAGAGC CGAAACAAAA TAATTTATTA CCTGAATTAG AAGAGAAGGC CCTTGAACAC
CTAGTGACAG AATTTGAGGG GAATATTATC TGTGAATATT TAGAGAAATT TGATGGGAAC
AAAACGAAGA CTGCAAAAGC GTTAGGAATT TCAGTTCGAA ACTTATATTA CAAGCTAGAA
AAGTATGACT GTGCAAAAAA TAGCATGCAA TAA
|
|---|
| Protein sequence | MKQNVLIVGA GEGGSTLLSL LQNSNIFQII GVIDSNPIAK GLQIAKEYGT PIGDSVTPFL
SMHIDVMFDM TGDYDLHKVL LGSKHKDTLL IPGDIAKIVT RLAHEKESLI GKLEEQTQQG
NLILNSTHDG MIVIDQEGQV RLFNKSAERI TGYKKEEAIG KYILEVIPTS KLLRIIRTKK
IEVNHELTLE NEKKIITTRI PILKEGGEVQ GAFAIFKDIT EVVDLAEEVT DLKEIQTLLE
AIINSSEEAI SVVDEKGRGL VINPAYTKLT GLTEEEIIGK PATTDIVEGE SMHMKVLRTR
RAVRGIHMKI GQKKRDVIVN VAPVIVDGIL KGSVGVIRDV SEIQKLTNEL NRARQIIRTL
EAKYSFDDIV GDSDETTAAI EQAKLGANTP ATVLLRGESG TGKELFAHAI HNSSNRKYNK
FVRVNCAAIS ETLLESELFG YEEGAFSGAK RGGKRGFFEE ANNGSVFLDE IGELSANTQA
KLLRVLQEKE IVKVGGTKAI PINVRVIAAT HVNLEKGILE GEFREDLYYR LNKIPIQIPS
LRQRKGDIPA IAERLIQKIN QDYGRNVEGL TDSAVSYLQS YEWPGNVREL ENILGRAIIF
MNYNEIYIDV HHLPPLHKEE QVEPKQNNLL PELEEKALEH LVTEFEGNII CEYLEKFDGN
KTKTAKALGI SVRNLYYKLE KYDCAKNSMQ
|
|---|
| |