Gene BcerKBAB4_3665 details

Gene Information

• Locus tag: BcerKBAB4_3665
• Symbol: rimM
• ID: 5843877
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus weihenstephanensis KBAB4
• Kingdom: Bacteria
• Replicon accession: NC_010184
• Strand: -
• Start bp: 3716147
• End bp: 3716662
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641378786
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_001646464
• Protein GI: 163941580
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000001599
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAAT GGTTTAATGT AGGGAAAATT GTAAATACTC ATGGCGTAAA AGGAGAAATT 
CGTGTTATTT CTCGTACTGA TTTTCCAGAA GAGCGATATA AAGTAGGGAA CACGTTATAC 
ATATGGGATG AGAAAGGTAC AGACTACCTT ACAGTGAAGG TAACTTCTCA TCGTCAACAT 
AAGACATTTG ATTTATTAAC ACTTGAAGGA TACAACAATG TAGATGAAGT AGAGAAGTTA 
AAAGGTTCTT TAATAAAAGT ACCAGAAGAG CAGTTAGGCG AACTAGCTGA AGGTGAATAC 
TACTACCATG AAATTATTGG TTGCAACGTT GTAACGGAAG AAGGAGAAGC GTTAGGGACA 
ATCAAAGAGA TTCTATCTCC TGGTGCGAAT GACGTTTGGG TGATTAAACG TCCAAAGGGT 
CAAGATTTGT TAATTCCTTA TATTGATGAC GTTGTACTTC AAGTTAACAT TGAAAATAAA 
TTAGTAACCA TTCATGTAAT GGAAGGGCTA CTATAA 

 

Protein sequence

MTKWFNVGKI VNTHGVKGEI RVISRTDFPE ERYKVGNTLY IWDEKGTDYL TVKVTSHRQH 
KTFDLLTLEG YNNVDEVEKL KGSLIKVPEE QLGELAEGEY YYHEIIGCNV VTEEGEALGT 
IKEILSPGAN DVWVIKRPKG QDLLIPYIDD VVLQVNIENK LVTIHVMEGL L