| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_3549 |
|---|
| Symbol | |
|---|
| ID | 5843761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 3605305 |
|---|
| End bp | 3606870 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641378672 |
|---|
| Product | phosphodiesterase |
|---|
| Protein accession | YP_001646350 |
|---|
| Protein GI | 163941466 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1418] Predicted HD superfamily hydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000213332 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTA GTACAGTTTG GATACTCATC TCCATTTTGC TTGCAACAGT CGGTGCAGTT
GTTGGCTTTT TTGTTCGAAA GTCTATTGCT GAAGCGAAGA TTAATGGTGC AGCTAATGAA
GCAAAACGTA TTCTAGACGA AGCGAATCGT GATGCTGAAG CACTTAAGAA AGAAGCGCTT
TTAGAAGCAA AGGATGAAAT TCATACACTT CGTACAGAAG CTGAATTAGA AATTCGTGAC
CGTAGAAGCG AATTACAAAA ACAAGAAAAT CGTTTAATGC AAAAAGAAGA GAACCTTGAT
CGTAAAGACG AAACGCTCGA TAACCGCGAG CGACAGTTAG AAAAGAAAGA GGAATCTCTT
GTAGCGAAAC AACAACAGAT TGAAGAGTTG GAAAGCAAAG TGGGAGAGTT AGTTCAAAAG
CAACAAACAG AATTAGAGCG CATTTCCAAT CTGACCCGCG AACAAGCGAA AGCAATTATT
CTTGGTAAAG TGGAAAGTGA AGTTTCTCAT GAAATTGCCG TTATGGTAAA AGAAAGTGAA
GTTCGCGCGA AAGAAGAAGC GGATAAGAAG GCAAAAGAGA TTTTATCTCT TGCAATGCAA
AGATGTGCAG CTGATCATGT TGCTGAAACA ACCGTTTCGG TTGTAAATCT TCCAAATGAC
GAAATGAAGG GACGTATTAT CGGACGTGAA GGTCGTAACA TTCGTACGTT AGAAACGTTA
ACAGGTATTG ACCTTATTAT CGATGATACA CCAGAAGCTG TAATTCTATC TGGATTTGAC
CCGATTCGTC GTGAAACAGC TCGTATCGCT CTTGATAAAC TAGTACAGGA CGGACGTATT
CACCCAGCGC GTATTGAAGA GATGGTCGAA AAATCAAGAC GTGAAGTGGA CGAGTATATT
CGTGAAGTCG GAGAGCAAAC AACGTTTGAA GTGGGTGTTC ATGGCTTACA TCCAGATTTA
ATTAAAATTT TAGGTCGTTT AAAATACCGT ACAAGTTACG GACAAAACGT CTTAAAACAC
TCTATGGAAG TTGCATACTT AACTGGACTT ATGGCAGCGG AGCTTGGTGA GGATGAAAAA
CTAGCAAGAC GTGCTGGTCT ATTACATGAT ATCGGAAAAG CAATCGATCA TGAAGTAGAA
GGTAGCCACG TTGAAATTGG TGTTGAACTC GCAACGAAAT ATAAAGAGCA TCCTGTTGTA
ATAAACAGTA TCGCATCTCA CCATGGTGAC ACAGAACCAA CTTCTATCAT TGCAGTTCTA
GTTGCTGCAG CAGATGCATT ATCAGCTGCA AGACCGGGAG CTCGTAGTGA AACGCTTGAG
AATTACATTC GTCGTCTTGA AAAGTTAGAA GAAATTTCAG AGTCTTATGA AGGCGTAGAA
AAATCTTTCG CAATTCAAGC AGGACGTGAA GTTCGTATTC TGGTAAAACC AGATACAATT
GATGATTTAG AAGCTCATCG TTTAGCTCGT GATATTCGAA AACGTATTGA AAATGAACTG
GATTATCCAG GACATATTAA AGTAACTGTT ATTCGTGAAA CACGTGCAGT GGAATACGCA
AAATAA
|
|---|
| Protein sequence | MSSSTVWILI SILLATVGAV VGFFVRKSIA EAKINGAANE AKRILDEANR DAEALKKEAL
LEAKDEIHTL RTEAELEIRD RRSELQKQEN RLMQKEENLD RKDETLDNRE RQLEKKEESL
VAKQQQIEEL ESKVGELVQK QQTELERISN LTREQAKAII LGKVESEVSH EIAVMVKESE
VRAKEEADKK AKEILSLAMQ RCAADHVAET TVSVVNLPND EMKGRIIGRE GRNIRTLETL
TGIDLIIDDT PEAVILSGFD PIRRETARIA LDKLVQDGRI HPARIEEMVE KSRREVDEYI
REVGEQTTFE VGVHGLHPDL IKILGRLKYR TSYGQNVLKH SMEVAYLTGL MAAELGEDEK
LARRAGLLHD IGKAIDHEVE GSHVEIGVEL ATKYKEHPVV INSIASHHGD TEPTSIIAVL
VAAADALSAA RPGARSETLE NYIRRLEKLE EISESYEGVE KSFAIQAGRE VRILVKPDTI
DDLEAHRLAR DIRKRIENEL DYPGHIKVTV IRETRAVEYA K
|
|---|
| |