| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_2986 |
|---|
| Symbol | |
|---|
| ID | 5843198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 3033754 |
|---|
| End bp | 3034926 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641378121 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001645799 |
|---|
| Protein GI | 163940915 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.327926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGTG TTCAGACGTT AAATCAAATT GCCGAAAAGG GTTTGCAAAT TTTTGATGGG
AATCGCTATG AAATTGGAGA CAAAGTAGGT CATCCAGATG GTATTTTACT TCGCAGCTAT
TCTTTACACC AAGAAGAGTT TTCAGAAGAT TTAAAGGCGA TTGCAAGAGC TGGTGCCGGG
GTAAATAATA TTCCTGTTGA GCGTTGTACG GAAAAAGGGA TTGTAGTATT TAATACGCCA
GGGGCTAATG CGAATGCAGT GAAGGAACTT ATTATCGCAA GCCTTATTAT GTCTTCCCGT
AATATTATAA ATGGAGTGAG CTGGACGAAA GAGTTGGATG GAGAAGAAGT ACCACAGCTT
GTTGAAGCAG GGAAAAAGCA ATTCGTTGGA TCAGAAATTG CAGGGAAACG TTTAGGTGTT
ATCGGTCTTG GCGCAATCGG TGCTTTAGTT GCGAACGATG CGTTATCTTT AGGGATGGAC
GTTGTTGGCT ACGACCCGTA TATATCAGTT GAAACAGCAT GGCGTCTTTC TACGCAAGTA
CAAAGAGCGT TTAGCCTAGA TGAAATCTTT GCAACGTGTG ATTATATTAC ACTTCATATT
CCTCTTACGA ACCAAACGAA GGGGATTATT GGTGAACACG CTATAGAGAC GATGAAAAAA
GGAATGCGTC TATTCAATTT CTCTAGAGGA GAACTTGTAG ATGAAACAGC TCTTCAAAAA
GCGTTAGAAG AAGATATTAT TACACATTAC GTAACAGATT TCCCGAATGA AAATGTGATA
AAGATGAAAA ATGTAACAGC AACGCCTCAT CTTGGTGCAT CTACGTCTGA ATCTGAAGAA
AATTGTGCAG TAATGGCTGC ACGTCAATTA CGTGAATATT TAGAGACAGG TAATATTCGT
AATTCAGTAA ACTATCCAAA CGTAGAACTT CCGTACATTG GAAAAAAACG AATTACAATT
ATGCATCAAA ACGTTCCGAA CATGGTAGGA CAAATTACAG GATGCTTAGC AGAACATCAT
ATTAATATTG CGGATATGAT TAATCGTAGT AAACATTCTT GGGCGTACAC AATGATTGAT
ATTGATAACG GAATTGATGA TATAATGAAA GAGAATATTG TGGAAAATAT AAGCAAAATC
ACAGGTGTTG TAGCTGTTCG AATGATTGTG TAA
|
|---|
| Protein sequence | MFRVQTLNQI AEKGLQIFDG NRYEIGDKVG HPDGILLRSY SLHQEEFSED LKAIARAGAG
VNNIPVERCT EKGIVVFNTP GANANAVKEL IIASLIMSSR NIINGVSWTK ELDGEEVPQL
VEAGKKQFVG SEIAGKRLGV IGLGAIGALV ANDALSLGMD VVGYDPYISV ETAWRLSTQV
QRAFSLDEIF ATCDYITLHI PLTNQTKGII GEHAIETMKK GMRLFNFSRG ELVDETALQK
ALEEDIITHY VTDFPNENVI KMKNVTATPH LGASTSESEE NCAVMAARQL REYLETGNIR
NSVNYPNVEL PYIGKKRITI MHQNVPNMVG QITGCLAEHH INIADMINRS KHSWAYTMID
IDNGIDDIMK ENIVENISKI TGVVAVRMIV
|
|---|
| |