Gene BcerKBAB4_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_2263 
Symbol 
ID5842476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp2328471 
End bp2329340 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content34% 
IMG OID641377433 
ProductRNA polymerase sigma factor SigJ 
Protein accessionYP_001645111 
Protein GI163940227 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.128308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGG AGCAGTTATA TGAAGCGTAT CAACCATTAT TATTTTCGTT AGCATATAGA 
ATCCTTGGGA GTGTTATGGA TGCTGAAGAT ATCGTCCATG ACGTATTTAT ATCGTTTAAT
AATATGGAGG ACGTTCAATC TATAGAAAAT ATGAGAGCCT ATTTATGTAA AATGGTAACA
AATCGCTCAA TTGACAAATT ACGTTCGGCA GCACATAAAC GTAACGTATA TGTCGGAATG
TGGTTGCCAG AGCCATTTGT GGAAGAGATT GATGATCCAT CAGAGTCATT TGTAATGAAA
GAATCAATTT CTACGGCATA TTTATTACTT TTACAACAAC TGACTGAGGT AGAGAGGGTT
GTTTTCATAT TAAGAGAGGT TTTTAGTTAT GACTACGAAG AAATCGCTTC GATTGTAGAA
AAGAGTAGTG TGAATTGCCG AAAAATCTTT CAACGTGCAC GAAAAAGTAT TTTAGATAAG
CCGAAGCAGT CAACATTAAG TACGAAGAAG ATGGCTGCTT ACGTGGAGAA ATTTGTTTCA
TCATTACAGT GTGGGGATAC GCAAGGCATG TTAGAAGTTT TAAAAACAGA TGCGATATTT
AAAGCAGATG GTGGTGGTAA AGTTACAACT GCAATTAATC CGATTTATTC TGCAGATAAA
ATTATACGTT TGTTCTTTGG AATTGCAAAA CGATTGCCAG AAAAGTATAG TGTTGATTTC
AAAATAGTAA ATGGTGCACC AGGCGTTATA GTTACAATAA ATAATAAAGT GACGTATGTA
CTTTCATTCA TATTTGAGGA TGAGAAAATT TCAAACATTT ATATGATGGT TAATCCAGAA
AAACTTATGC ACTTAAATGT AATAGTATAA
 
Protein sequence
METEQLYEAY QPLLFSLAYR ILGSVMDAED IVHDVFISFN NMEDVQSIEN MRAYLCKMVT 
NRSIDKLRSA AHKRNVYVGM WLPEPFVEEI DDPSESFVMK ESISTAYLLL LQQLTEVERV
VFILREVFSY DYEEIASIVE KSSVNCRKIF QRARKSILDK PKQSTLSTKK MAAYVEKFVS
SLQCGDTQGM LEVLKTDAIF KADGGGKVTT AINPIYSADK IIRLFFGIAK RLPEKYSVDF
KIVNGAPGVI VTINNKVTYV LSFIFEDEKI SNIYMMVNPE KLMHLNVIV