Gene BcerKBAB4_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_2166 
Symbol 
ID5842379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp2223539 
End bp2224696 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content35% 
IMG OID641377337 
Productnuclease SbcCD, D subunit 
Protein accessionYP_001645015 
Protein GI163940131 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID[TIGR00619] exonuclease SbcD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0226896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTT TTCATACAGC GGATTGGCAT TTAGGTAAGC TTGTTCATGG TGTATATATG 
ACTGAAGATC AAAAAATTGT GTTAGATCAG TTTGTACAAG CTGTTGAAGA GGAAAAACCG
GATGCTGTAA TTATTGCAGG AGATTTATAT GACCGAGCAA TTCCACCTAC AGAAGCAGTA
GACTTATTAA ATGATGTATT ACAAAAGATA GTTATTGATT TACAAACACC AATAATCGCA
GTTGCAGGAA ACCACGATAG TCCGGACCGC ATACATTTTG GTAGTAATTT AATGAAAAAA
CAAGGATTAC ATATTGTTGG ACAATTCCAG TTTCCATACA ATCCTGTTGT TTTAAATGAT
GAATACGGAG AGGTTCATTT CCATCTCGTT CCGTATGCAG ATCCAAGTAT TGTTAGACAT
ATATTGAAAA ATGAAGATGT TCGTTCTCAT GATGATGCGA TGCGTATTTT TATGAACGAA
CTCTCTGAAA CGATGGATAA AGAAGCGAGA CACATATTTG TAGGACATGC ATTTGTAACT
TCTTCAGGAG AGGCAGAGGA AAATACGAGT GATGCGGAAC GACCACTTTC AATTGGTGGT
GCTGAATATG TAAATAGCCA TTATTTTGAT AAGTTTCATT ACACGGCGCT TGGCCATTTA
CATCAAGCGC GTTTTGTACG TAATGAGACA ATTCGTTATT CAGGTTCACC ACTTGCATAT
TCTATTTCTG AAGAAAAGCA TAAAAAAGGA TATTATATTG TGGAACTGGA TGAAAAAGGT
GAAACAACAA TTGAAAAACG TTTACTTACA CCACGTCGTA AAATGCGTAC AGTAGAAGCG
AAAATAGACG ATTTATTGCT TCATCCAGTG AGTGAAGATT ATGTATTTGT GAAATTATTA
GATGAAAATC CTGTCTTGCA GCCAATGGAA AAAATACGTT CTGTATACCC AAATGCAATG
CATGTTGAAA GATCTATTCA AAGACGAGAG TTCACAGATG AAAATGAAGT AACTGTTTCA
AGACATAAAA CGGATGATTT ATCTCTTTTA AAAGCATTTT ATAAAGAAAT GAAAGGGCTA
GATTTATCAG AAGAGAAAGA ACGTCTATTT TTAGATGTTT TGCAAACAGT GCAAGAACGG
GAAGGTGAGC GAGGATGA
 
Protein sequence
MKFFHTADWH LGKLVHGVYM TEDQKIVLDQ FVQAVEEEKP DAVIIAGDLY DRAIPPTEAV 
DLLNDVLQKI VIDLQTPIIA VAGNHDSPDR IHFGSNLMKK QGLHIVGQFQ FPYNPVVLND
EYGEVHFHLV PYADPSIVRH ILKNEDVRSH DDAMRIFMNE LSETMDKEAR HIFVGHAFVT
SSGEAEENTS DAERPLSIGG AEYVNSHYFD KFHYTALGHL HQARFVRNET IRYSGSPLAY
SISEEKHKKG YYIVELDEKG ETTIEKRLLT PRRKMRTVEA KIDDLLLHPV SEDYVFVKLL
DENPVLQPME KIRSVYPNAM HVERSIQRRE FTDENEVTVS RHKTDDLSLL KAFYKEMKGL
DLSEEKERLF LDVLQTVQER EGERG