Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_1887 |
Symbol | |
ID | 5842100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | + |
Start bp | 1953180 |
End bp | 1953839 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641377069 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001644747 |
Protein GI | 163939863 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00928979 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGC GAACAGCGTT AGTACTTGGC GCAAGTGGAT TAGTTGGACA AGAAATAACG CGACTATTAC TTGACTCAGA TTACTACGAT TCGGTTACTA TTTTTGTAAG GGAATCATTA CAATTACAGC ATGAGAAATT GCAACAGAAA CAGGTGGATT TTTCAGTATT AGAGGAATAC AAAGAATTTT TTGCAGTAGA TGATGTTTTT AGTTGCTTAG GAACAACGAT AAAAAAAGCG AAGTCGAAGT CGAATTTTAA AAAAGTAGAT TATGAATATA CATTACGAGC TGCCTGCTTA GCTGAAAAAC AAGGTGTGCA AAATTTTCTT GTTATTTCAT CAATGGGAGC AAAACCTAAA TCATTTTTCT TTTACTCGCA AGTGAAGGGG AAAATGGAAG AGGAGCTGAA AAAGCTAGTT ATTGGTGGCA TACATATTTT TAGGCCGTCA TTATTAGTTG GAAATCGAAA AGAATATCGT TTTGGGGAAA GAATGGCTGA GAAATTATCT CGTATTCTTC CGTTTATATT TAAAGGGGCT TTTAAAAAGT ATAAACCAAT TTCAGCTAAA GATGTGGCGA AAGGAATGTA TATAACAGCG CTACGTGAAG AATCTGGTAT TCATATTTAT AGTTCAAACG ATATTATAGA AATAAAATAA
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Protein sequence | MNKRTALVLG ASGLVGQEIT RLLLDSDYYD SVTIFVRESL QLQHEKLQQK QVDFSVLEEY KEFFAVDDVF SCLGTTIKKA KSKSNFKKVD YEYTLRAACL AEKQGVQNFL VISSMGAKPK SFFFYSQVKG KMEEELKKLV IGGIHIFRPS LLVGNRKEYR FGERMAEKLS RILPFIFKGA FKKYKPISAK DVAKGMYITA LREESGIHIY SSNDIIEIK
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