Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_1829 |
Symbol | |
ID | 5842042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | + |
Start bp | 1898932 |
End bp | 1899762 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641377012 |
Product | polysaccharide deacetylase |
Protein accession | YP_001644690 |
Protein GI | 163939806 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00572259 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTATT TTTACGCACC AGAAATGTTC GTTCCATTTC ATTGGGGACT AGAACGAAAT GTTTCGTATG CTTATATGCC ATATCATTCA TTTTATTATG GAAACTATAT AGACGCAGTG CCGTATGTAT TAAATGTTCC GCAAAATGAT CAAGTCAAAG TGAAGGAAGA GAATCGGGGG TCATGGACAC CTTTTTCATG GGTTGAAAAA TATGCGTATG CATTTTCAGG ACCATACAAT AAAGCGGAAG TAGCTCTTAC ATTTGATGAT GGACCAGATT TAGTATTTAC GCCAAAAATT TTAGATAAGT TAAAACAATA TAATGTAAAA GCTACTTTTT TCTTACTTGG TGAAAATGCA GAAAAGTTTC CGAATGTAGT AAAGCGTATC GCGAATGAAG GGCATGTAAT TGGTAATCAT ACGTATAATC ATCCGAATTT AGCGAAAGTA AATGAGGCTG AGTACCGTAA TCAAATTATA AAAACGGAAG AAATATTAAA TCGTTTAGCT GGTTATGCTC CTAAATTTAT ACGTCCACCG TATGGTGAAA TACTTGAAAA TCAATTGAAG TGGGCGACGG AGCAAAATTT TATGATTGTA CAGTGGAGTG TTGATACAGT TGATTGGAAA GGGGTAAGTG CGGATACGAT TACAAATAAT GTGCTAGGGA ATTCATTTCC AGGAAGTGTC ATACTTCAGC ATTCAACTCC AGGTGGACAC TTACAAGGAT CTGTAGATGC GCTAGACAAA ATCATTCCAC AGTTAAAAAC GAAAGGGGCA CGTTTTGTAA CACTTCCAAG TATGTTCCAG ACATCTAAAG AGAGAAAATA A
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Protein sequence | MYYFYAPEMF VPFHWGLERN VSYAYMPYHS FYYGNYIDAV PYVLNVPQND QVKVKEENRG SWTPFSWVEK YAYAFSGPYN KAEVALTFDD GPDLVFTPKI LDKLKQYNVK ATFFLLGENA EKFPNVVKRI ANEGHVIGNH TYNHPNLAKV NEAEYRNQII KTEEILNRLA GYAPKFIRPP YGEILENQLK WATEQNFMIV QWSVDTVDWK GVSADTITNN VLGNSFPGSV ILQHSTPGGH LQGSVDALDK IIPQLKTKGA RFVTLPSMFQ TSKERK
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