Gene BcerKBAB4_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_1533 
Symbol 
ID5841747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp1587108 
End bp1587653 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content29% 
IMG OID641376728 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_001644406 
Protein GI163939522 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.373295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATGA TTTTTGATTC TGAAGAGGAT TTAATTATAG CTATGAAAAA ACGTGATCAA 
GATGCTTTGA AAGAAGTCAT TGATCAATAT GGAAAATTAA TTTTATACAT TATTCATAAA
TCATTAAGTA CCCCTATTGA GAAACAATAT GTAGATGATT GTTATAACGA TGTATTTACT
GTCATTTGGT TTAATATCGA CCAATTTGAT ATAGAAAAGG GAAACTTAAA ATCTTGGATG
ATTGGTATTA CTAAATTAAA GGCCTTGGAA TATAAAAAGA AAGTATATAG AGAGAACAAA
ATGGATAAAG ACGTCGAAAT AGATAAAGGT ATCCATGATA GTTATGAAAT AGAACAAGAA
GAAGAGATTA TGGAAATCGT GCAAGATTTA AATAAAAAGG ATCGATATAT CTTCTTAAAG
AGGTATATTG ATGGTTATTC CATTGACGAT ATTGCAAAAG AATTAAAAGT AACGGCGGAT
TATATATACA ACCGAATTTC TCGAGGGAAG AAAAAACTTC AAAAACTGTG GAAGGGGAGT
GTGTAA
 
Protein sequence
MFMIFDSEED LIIAMKKRDQ DALKEVIDQY GKLILYIIHK SLSTPIEKQY VDDCYNDVFT 
VIWFNIDQFD IEKGNLKSWM IGITKLKALE YKKKVYRENK MDKDVEIDKG IHDSYEIEQE
EEIMEIVQDL NKKDRYIFLK RYIDGYSIDD IAKELKVTAD YIYNRISRGK KKLQKLWKGS
V