Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_0953 |
Symbol | |
ID | 5841165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | + |
Start bp | 1029095 |
End bp | 1029628 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641376153 |
Product | RNA polymerase factor sigma C |
Protein accession | YP_001643833 |
Protein GI | 163938949 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000121905 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATGAAT TAACGGTAGA AGCGTTTGAA ATAGAAGATA AGGAACTCCT TATCGATGAA ATAATGAACA AGTATGGACA AGAAGTCTTA CAGCTTGTGT ATTCATATGT GAATAATAAA GAAGTCGCTG AGGATTTAAC GCAAGATATA TTTGTGAAAT GTTATAAATC TCTTCATACA TACAAAGGGA AATCGAATGT GAAAACGTGG TTGTGGAGAA TTGCGATTAA TCAATGTAAG GACTACATAA AAAGTTGGTA TAACAAAAAG GTGATCGTGA CAGAGGATGA AGCTGCTTAT ATTGGGGTTC AAAATGATAG TGTCGAACAA ACTGTTATTC AAAATGCGGA GGACCGTGAG CTCGCTTCTG CAGTAATGAG TTTGCCGATA AAATATCGAG AAGTCATTTA TCTATTTTAT TATGAAGAAC TATCAATTAA AGAGATTGCT ATTGTAATAG AAGTGAAAGA AAACACGATA AAAACGAGAC TGAAAAAAGC GAAGGAGCTT TTGAAGAAAG GATTGGAGGA ATAA
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Protein sequence | MDELTVEAFE IEDKELLIDE IMNKYGQEVL QLVYSYVNNK EVAEDLTQDI FVKCYKSLHT YKGKSNVKTW LWRIAINQCK DYIKSWYNKK VIVTEDEAAY IGVQNDSVEQ TVIQNAEDRE LASAVMSLPI KYREVIYLFY YEELSIKEIA IVIEVKENTI KTRLKKAKEL LKKGLEE
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