Gene BcerKBAB4_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_0953 
Symbol 
ID5841165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp1029095 
End bp1029628 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content34% 
IMG OID641376153 
ProductRNA polymerase factor sigma C 
Protein accessionYP_001643833 
Protein GI163938949 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000121905 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGAAT TAACGGTAGA AGCGTTTGAA ATAGAAGATA AGGAACTCCT TATCGATGAA 
ATAATGAACA AGTATGGACA AGAAGTCTTA CAGCTTGTGT ATTCATATGT GAATAATAAA
GAAGTCGCTG AGGATTTAAC GCAAGATATA TTTGTGAAAT GTTATAAATC TCTTCATACA
TACAAAGGGA AATCGAATGT GAAAACGTGG TTGTGGAGAA TTGCGATTAA TCAATGTAAG
GACTACATAA AAAGTTGGTA TAACAAAAAG GTGATCGTGA CAGAGGATGA AGCTGCTTAT
ATTGGGGTTC AAAATGATAG TGTCGAACAA ACTGTTATTC AAAATGCGGA GGACCGTGAG
CTCGCTTCTG CAGTAATGAG TTTGCCGATA AAATATCGAG AAGTCATTTA TCTATTTTAT
TATGAAGAAC TATCAATTAA AGAGATTGCT ATTGTAATAG AAGTGAAAGA AAACACGATA
AAAACGAGAC TGAAAAAAGC GAAGGAGCTT TTGAAGAAAG GATTGGAGGA ATAA
 
Protein sequence
MDELTVEAFE IEDKELLIDE IMNKYGQEVL QLVYSYVNNK EVAEDLTQDI FVKCYKSLHT 
YKGKSNVKTW LWRIAINQCK DYIKSWYNKK VIVTEDEAAY IGVQNDSVEQ TVIQNAEDRE
LASAVMSLPI KYREVIYLFY YEELSIKEIA IVIEVKENTI KTRLKKAKEL LKKGLEE